def test_set_outfile_directory(self):
model_infile_var = "ErrorModelSolexa36bp.mconf"
taxon_infile_var = "MetaSim_bint.mprf"
outfile_var = "wdir_all_reads_out.fasta"
metasim = RunMetaSim(model_file=model_infile_var, no_reads=100,
taxon_infile=taxon_infile_var, pdir=self.data_dir, wdir=self.working_dir,
filename=outfile_var, check_exist=True)
self.assertEqual(metasim.get_all_switches()[3], "-d%s" % self.working_dir)
dir_var = self.data_dir
metasim = RunMetaSim(model_file=model_infile_var, no_reads=100,
taxon_infile=taxon_infile_var, pdir=self.data_dir, wdir=dir_var,
filename=outfile_var, check_exist=False)
metasim.set_outfile_directory()
self.assertEqual(metasim.get_all_switches()[3], "-d%s" % self.data_dir)
