def load_rrt(self):
file_path = os.path.join(app.root_path, 'static', 'reference',
'rrt_documents.xlsx')
file = open(file_path, "rb")
FileService.add_reference_file(FileService.DOCUMENT_LIST,
binary_data=file.read(),
content_type=CONTENT_TYPES['xls'])
file.close()
category = WorkflowSpecCategoryModel(
id=0,
name='research_rampup_category',
display_name='Research Ramp-up Category',
display_order=0)
db.session.add(category)
db.session.commit()
self.create_spec(
id="rrt_top_level_workflow",
name="rrt_top_level_workflow",
display_name="Top Level Workflow",
description="Does nothing, we don't use the master workflow here.",
category_id=None,
master_spec=True)
self.create_spec(
id="research_rampup",
name="research_rampup",
display_name="Research Ramp-up Toolkit",
description="Process for creating a new research ramp-up request.",
category_id=0,
master_spec=False)
def create_reference_document(self):
file_path = os.path.join(app.root_path, 'static', 'reference',
'irb_documents.xlsx')
file = open(file_path, "rb")
FileService.add_reference_file(FileService.DOCUMENT_LIST,
binary_data=file.read(),
content_type=CONTENT_TYPES['xls'])
file.close()
def set_reference_file(name):
"""Uses the file service to manage reference-files. They will be used in script tasks to compute values."""
if 'file' not in connexion.request.files:
raise ApiError('invalid_file',
'Expected a file named "file" in the multipart form request', status_code=400)
file = connexion.request.files['file']
name_extension = FileService.get_extension(name)
file_extension = FileService.get_extension(file.filename)
if name_extension != file_extension:
raise ApiError('invalid_file_type',
"The file you uploaded has an extension '%s', but it should have an extension of '%s' " %
(file_extension, name_extension))
file_models = FileService.get_files(name=name, is_reference=True)
if len(file_models) == 0:
file_model = FileService.add_reference_file(name, file.content_type, file.stream.read())
else:
file_model = file_models[0]
FileService.update_file(file_models[0], file.stream.read(), file.content_type)
return FileSchema().dump(to_file_api(file_model))