def run(self,job_record): job_record['qmc']['kpoint_weights'] = \ convert_crystal( base="qw", kfmt='int', kset=job_record['qmc']['kpoints']).tolist() return 'ok'
def export_qwalk(self): ''' Export QWalk input files into current directory. Returns: bool: whether it was successful.''' self.recover(pkl.load(open(self.path + self.pickle, 'rb'))) ready = False if len(self.qwfiles['slater']) == 0: self.nextstep() if not self.completed: return False cwd = os.getcwd() os.chdir(self.path) print(self.logname, ": %s attempting to generate QWalk files." % self.name) # Check on the properties run status = resolve_status(self.prunner, self.preader, self.propoutfn) print(self.logname, ": properties status= %s" % (status)) if status == 'not_started': ready = False self.prunner.add_command("cp %s INPUT" % self.propinpfn) self.prunner.add_task("%s &> %s" % (paths['Pproperties'], self.propoutfn)) if self.bundle: self.scriptfile = "%s.run" % self.name self.bundle_ready = self.prunner.script( self.scriptfile, self.driverfn) else: qsubfile = self.runner.submit( self.path.replace('/', '-') + self.name) elif status == 'ready_for_analysis': self.preader.collect(self.propoutfn) if self.preader.completed: ready = True print(self.logname, ": converting crystal to QWalk input now.") self.qwfiles = crystal2qmc.convert_crystal( base=self.name, propoutfn=self.propoutfn) else: ready = False print( self.logname, ": conversion postponed because properties is not finished." ) os.chdir(cwd) else: ready = True with open(self.path + self.pickle, 'wb') as outf: pkl.dump(self, outf) return ready
def run(self,job_record): _,_,_,_,_,eigsys =\ convert_crystal( base="qw", kfmt='int', kset=job_record['qmc']['kpoints']) job_record['kpt_weights'] = eigsys['kpt_weights'].tolist() job_record['dft']['eigvals'] = eigsys['eigvals'].tolist() return 'ok'
def run(self): self.kweights=list(crystal2qmc.convert_crystal(self.qwbase,self.propoutfn, self.kfmt,self.kset)) print(self.kweights)
def run(self, job_record): job_record["qmc"]["kpoint_weights"] = convert_crystal( base="qw", kfmt="int", kset=job_record["qmc"]["kpoints"] ).tolist() return "ok"