def test_redefined_args(self): runtime_context = RuntimeContext() runtime_context.use_container = False runtime_context.on_error = "continue" f = cwltool.factory.Factory(runtime_context=runtime_context) assert f.runtime_context.use_container is False assert f.runtime_context.on_error == "continue"
def test_redefined_args(self): runtime_context = RuntimeContext() runtime_context.use_container = False runtime_context.on_error = "continue" f = cwltool.factory.Factory(runtime_context=runtime_context) assert f.runtime_context.use_container is False assert f.runtime_context.on_error == "continue"
def test_factory_redefined_args() -> None: runtime_context = RuntimeContext() runtime_context.use_container = False runtime_context.on_error = "continue" factory = cwltool.factory.Factory(runtime_context=runtime_context) assert factory.runtime_context.use_container is False assert factory.runtime_context.on_error == "continue"
def test_compute_checksum(): runtime_context = RuntimeContext() runtime_context.compute_checksum = True runtime_context.use_container = onWindows() factory = cwltool.factory.Factory(runtime_context=runtime_context) echo = factory.make(get_data("tests/wf/cat-tool.cwl")) output = echo( file1={"class": "File", "location": get_data("tests/wf/whale.txt")}, reverse=False) assert output['output']["checksum"] == "sha1$327fc7aedf4f6b69a42a7c8b808dc5a7aff61376"
def test_compute_checksum(self): runtime_context = RuntimeContext() runtime_context.compute_checksum = True runtime_context.use_container = onWindows() f = cwltool.factory.Factory(runtime_context=runtime_context) echo = f.make(get_data("tests/wf/cat-tool.cwl")) output = echo( file1={"class": "File", "location": get_data("tests/wf/whale.txt")}, reverse=False) self.assertEquals(output['output']["checksum"], "sha1$327fc7aedf4f6b69a42a7c8b808dc5a7aff61376")
def get_windows_safe_factory(runtime_context=None, # type: RuntimeContext loading_context=None, # type: LoadingContext executor=None # type: Any ): # type: (...) -> Factory if onWindows(): if not runtime_context: runtime_context = RuntimeContext() runtime_context.find_default_container = functools.partial( force_default_container, windows_default_container_id) runtime_context.use_container = True runtime_context.default_container = windows_default_container_id return Factory(executor, loading_context, runtime_context)
def get_windows_safe_factory(runtime_context=None, # type: RuntimeContext loading_context=None, # type: LoadingContext executor=None # type: Any ): # type: (...) -> Factory if onWindows(): if not runtime_context: runtime_context = RuntimeContext() runtime_context.find_default_container = functools.partial( force_default_container, windows_default_container_id) runtime_context.use_container = True runtime_context.default_container = windows_default_container_id return Factory(executor, loading_context, runtime_context)
def test_compute_checksum() -> None: runtime_context = RuntimeContext() runtime_context.compute_checksum = True runtime_context.use_container = onWindows() factory = cwltool.factory.Factory(runtime_context=runtime_context) echo = factory.make(get_data("tests/wf/cat-tool.cwl")) output = echo( file1={"class": "File", "location": get_data("tests/wf/whale.txt")}, reverse=False, ) assert isinstance(output, dict) result = output["output"] assert isinstance(result, dict) assert result["checksum"] == "sha1$327fc7aedf4f6b69a42a7c8b808dc5a7aff61376"