def test_site_submission(setup_orthanc0):
reset_mock_seed()
O = Orthanc()
assert (O.check())
n_instances_init = O.gateway.statistics()["CountInstances"]
logging.debug(O.gateway.statistics())
site_desc = yaml.load(sample_site_desc)
H = MockSite.Factory.create(desc=site_desc)[0]
try:
with timeout(15):
print("Starting mock site")
H.run(pacs=O)
except:
print("Stopping mock site")
n_instances = O.gateway.statistics()["CountInstances"]
# At least 500 new instances arrived in the last 15 seconds
assert (n_instances > n_instances_init + 500)
def mock_runner():
"""Generates a single CR study and sends to the mock pacs"""
reset_mock_seed()
print("Starting mock site")
O = Orthanc()
desc = yaml.load(site_desc)
H = MockSite.Factory.create(desc=desc)[0]
H.run(pacs=O)
print("Stopping mock site")
def test_mock_site():
reset_mock_seed()
site_desc = yaml.load(sample_site_desc)
logging.debug(pformat(site_desc))
H = MockSite.Factory.create(desc=site_desc)[0]
logging.debug(H)
logging.debug(list(H.devices()))
assert (len(list(H.devices())) == 5)
for device in H.devices():
s = device.gen_study(study_datetime=ref_dt)
# print("{!s}".format( next(s.instances()) ))
assert ("{!s}".format(next(s.instances())) in ref_studies)
def test_mock_dixel():
reset_mock_seed()
d = MockStudy(study_datetime=ref_dt)
inst = list(d.instances())[-1]
# Check reproducibility
reset_mock_seed()
e = MockStudy(study_datetime=ref_dt)
assert (inst.tags == list(e.instances())[-1].tags)
# Check correctness
logging.debug(inst.tags)
assert (inst.tags == ref_inst_tags)
logging.debug(len(list(d.instances())))
assert (len(list(d.instances())) == ref_n_instances)
for item in d.instances():
logging.debug("{!s}".format(item))
# Check file creation
inst.gen_file()
inst_dcm = find_resource("resources/mock/inst.dcm")
# Reset mock/inst.dcm with fresh data
with open(inst_dcm, "wb") as f:
f.write(inst.file)
with open(inst_dcm, "rb") as f:
data = f.read()
assert (inst.file == data)
# Test file legibility
ds = pydicom.dcmread(BytesIO(inst.file))
logging.debug(ds)
assert (ds.AccessionNumber == d.tags["AccessionNumber"])
# Test new item is unique
f = MockStudy(study_datetime=ref_dt)
for item in f.instances():
logging.debug("{!s}".format(item))
assert (d.tags["AccessionNumber"] != f.tags["AccessionNumber"])