def post_install_step(self):
"""Custom post install step for FFTW.MPI"""
# remove everything except include files that are already in non-MPI FFTW dependency.
remove(
glob.glob(os.path.join(self.installdir, 'lib', 'libfftw.*')) +
glob.glob(os.path.join(self.installdir, 'lib', 'libfftw[lf].*')) +
[
os.path.join(self.installdir, p)
for p in ['bin', 'lib/pkgconfig', 'lib/cmake', 'share']
])
super(EB_FFTW_period_MPI, self).post_install_step()
def test_step(self):
"""Run DOLFIN demos by means of test."""
if self.cfg['runtest']:
# set cache/error dirs for Instant
tmpdir = tempfile.mkdtemp()
instant_cache_dir = os.path.join(tmpdir, '.instant', 'cache')
instant_error_dir = os.path.join(tmpdir, '.instant', 'error')
try:
os.makedirs(instant_cache_dir)
os.makedirs(instant_error_dir)
except OSError as err:
raise EasyBuildError(
"Failed to create Instant cache/error dirs: %s", err)
env_vars = [
('INSTANT_CACHE_DIR', instant_cache_dir),
('INSTANT_ERROR_DIR', instant_error_dir),
]
env_var_cmds = ' && '.join(
['export %s="%s"' % (var, val) for (var, val) in env_vars])
# test command templates
cmd_template_python = " && ".join([
env_var_cmds,
"cd %(dir)s",
"python demo_%(name)s.py",
"cd -",
])
cpp_cmds = [
env_var_cmds,
"cd %(dir)s",
]
if LooseVersion(self.version) < LooseVersion('1.1'):
cpp_cmds.append("cmake . %s" % self.saved_configopts)
cpp_cmds.extend([
"make VERBOSE=1",
"./demo_%(name)s",
"cd -",
])
cmd_template_cpp = " && ".join(cpp_cmds)
# list based on demos available for DOLFIN v1.0.0
pde_demos = [
'biharmonic', 'cahn-hilliard', 'hyperelasticity',
'mixed-poisson', 'navier-stokes', 'poisson', 'stokes-iterative'
]
if LooseVersion(self.version) < LooseVersion('1.1'):
demos = [os.path.join('demo', 'la', 'eigenvalue')] + [
os.path.join('demo', 'pde', x) for x in pde_demos
]
else:
# verified with v1.6.0
demos = [
os.path.join('demo', 'documented', x) for x in pde_demos
]
# construct commands
cmds = [
tmpl % {
'dir': os.path.join(d, subdir),
'name': os.path.basename(d)
} for d in demos
for (tmpl, subdir) in [(cmd_template_cpp, 'cpp')]
]
# exclude Python tests for now, because they 'hang' sometimes (unclear why)
# they can be reinstated once run_cmd (or its equivalent) has support for timeouts
# see https://github.com/easybuilders/easybuild-framework/issues/581
#for (tmpl, subdir) in [(cmd_template_python, 'python'), (cmd_template_cpp, 'cpp')]]
# subdomains-poisson has no C++ get_version, only Python
# Python tests excluded, see above
#name = 'subdomains-poisson'
#path = os.path.join('demo', 'pde', name, 'python')
#cmds += [cmd_template_python % {'dir': path, 'name': name}]
# supply empty argument to each command
for cmd in cmds:
run_cmd(cmd, log_all=True)
# clean up temporary dir
remove(tmpdir)
def test_step(self):
"""Run DOLFIN demos by means of test."""
if self.cfg['runtest']:
# set cache/error dirs for Instant
tmpdir = tempfile.mkdtemp()
instant_cache_dir = os.path.join(tmpdir, '.instant', 'cache')
instant_error_dir = os.path.join(tmpdir, '.instant', 'error')
try:
os.makedirs(instant_cache_dir)
os.makedirs(instant_error_dir)
except OSError, err:
raise EasyBuildError("Failed to create Instant cache/error dirs: %s", err)
env_vars = [
('INSTANT_CACHE_DIR', instant_cache_dir),
('INSTANT_ERROR_DIR', instant_error_dir),
]
env_var_cmds = ' && '.join(['export %s="%s"' % (var, val) for (var, val) in env_vars])
# test command templates
cmd_template_python = " && ".join([
env_var_cmds,
"cd %(dir)s",
"python demo_%(name)s.py",
"cd -",
])
cpp_cmds = [
env_var_cmds,
"cd %(dir)s",
]
if LooseVersion(self.version) < LooseVersion('1.1'):
cpp_cmds.append("cmake . %s" % self.saved_configopts)
cpp_cmds.extend([
"make VERBOSE=1",
"./demo_%(name)s",
"cd -",
])
cmd_template_cpp = " && ".join(cpp_cmds)
# list based on demos available for DOLFIN v1.0.0
pde_demos = ['biharmonic', 'cahn-hilliard', 'hyperelasticity', 'mixed-poisson',
'navier-stokes', 'poisson', 'stokes-iterative']
if LooseVersion(self.version) < LooseVersion('1.1'):
demos = [os.path.join('demo', 'la', 'eigenvalue')] + [os.path.join('demo', 'pde', x) for x in pde_demos]
else:
# verified with v1.6.0
demos = [os.path.join('demo', 'documented', x) for x in pde_demos]
# construct commands
cmds = [tmpl % {'dir': os.path.join(d, subdir), 'name': os.path.basename(d)}
for d in demos for (tmpl, subdir) in [(cmd_template_cpp, 'cpp')]]
# exclude Python tests for now, because they 'hang' sometimes (unclear why)
# they can be reinstated once run_cmd (or its equivalent) has support for timeouts
# see https://github.com/easybuilders/easybuild-framework/issues/581
#for (tmpl, subdir) in [(cmd_template_python, 'python'), (cmd_template_cpp, 'cpp')]]
# subdomains-poisson has no C++ get_version, only Python
# Python tests excluded, see above
#name = 'subdomains-poisson'
#path = os.path.join('demo', 'pde', name, 'python')
#cmds += [cmd_template_python % {'dir': path, 'name': name}]
# supply empty argument to each command
for cmd in cmds:
run_cmd(cmd, log_all=True)
# clean up temporary dir
remove(tmpdir)