def save( self, aFileName = None ):
if aFileName is not None:
self.setFileName( aFileName )
# open the file
aOutputFile = open(self.theFileName,'w')
# writes header
aOutputFile.write(self.getHeaderString())
aOutputFile.close()
TableIO.writeArray( self.theFileName, self.theData, 1 )
def save(self, aFileName=None):
if aFileName is not None:
self.setFileName(aFileName)
# open the file
aOutputFile = open(self.theFileName, 'w')
# writes header
aOutputFile.write(self.getHeaderString())
aOutputFile.close()
TableIO.writeArray(self.theFileName, self.theData, 1)
def load( self, aFileName = None ):
if aFileName is not None:
self.setFileName( aFileName )
def readOneLineData( aInputFile, aKey ):
aBuff = aInputFile.readline()
if aBuff.find( aKey ) != 0:
raise "Error: %s is not ECD format. '%s' line can't be found." %aKey
return aBuff[len(aKey):].strip()
if( len(self.theFileName) == 0):
raise "Error: empty filename."
# open the file
aInputFile = open(self.theFileName,'r')
# read header
#FIXME: do not depend on the order of header elements
# --------------------------------------------------------
# [1] read DATA:
# --------------------------------------------------------
self.setDataName( readOneLineData(aInputFile,'#DATA:') )
# --------------------------------------------------------
# [2] read SIZE:
# --------------------------------------------------------
# ignore SIZE:
readOneLineData(aInputFile,'#SIZE:')
# --------------------------------------------------------
# [3] read LABEL:
# --------------------------------------------------------
self.setLabel( readOneLineData(aInputFile,'#LABEL:') )
# --------------------------------------------------------
# [4] read NOTE:
# --------------------------------------------------------
self.setNote( readOneLineData(aInputFile,'#NOTE:') )
# --------------------------------------------------------
# [5] read some lines before matrix data
# --------------------------------------------------------
# read matrix
while(1): # while 1
aBuff = aInputFile.readline()
# if EOF is found, breaks this loop.
if aBuff == '':
break
# if separator is found, breaks this loop.
if aBuff.find( '#----------------------' ) == 0:
break
# end of while 1
# ----------------------------------------------------------
# [6] reads matrix data
# ----------------------------------------------------------
#close the file
aInputFile.close()
self.setData( TableIO.readTableAsArray( self.theFileName, '#' ) )
def load(self, aFileName=None):
if aFileName is not None:
self.setFileName(aFileName)
def readOneLineData(aInputFile, aKey):
aBuff = aInputFile.readline()
if aBuff.find(aKey) != 0:
raise "Error: %s is not ECD format. '%s' line can't be found." % aKey
return aBuff[len(aKey):].strip()
if (len(self.theFileName) == 0):
raise "Error: empty filename."
# open the file
aInputFile = open(self.theFileName, 'r')
# read header
#FIXME: do not depend on the order of header elements
# --------------------------------------------------------
# [1] read DATA:
# --------------------------------------------------------
self.setDataName(readOneLineData(aInputFile, '#DATA:'))
# --------------------------------------------------------
# [2] read SIZE:
# --------------------------------------------------------
# ignore SIZE:
readOneLineData(aInputFile, '#SIZE:')
# --------------------------------------------------------
# [3] read LABEL:
# --------------------------------------------------------
self.setLabel(readOneLineData(aInputFile, '#LABEL:'))
# --------------------------------------------------------
# [4] read NOTE:
# --------------------------------------------------------
self.setNote(readOneLineData(aInputFile, '#NOTE:'))
# --------------------------------------------------------
# [5] read some lines before matrix data
# --------------------------------------------------------
# read matrix
while (1): # while 1
aBuff = aInputFile.readline()
# if EOF is found, breaks this loop.
if aBuff == '':
break
# if separator is found, breaks this loop.
if aBuff.find('#----------------------') == 0:
break
# end of while 1
# ----------------------------------------------------------
# [6] reads matrix data
# ----------------------------------------------------------
#close the file
aInputFile.close()
self.setData(TableIO.readTableAsArray(self.theFileName, '#'))
