def test_removePostfixes(regtest):
t = Table._create(["abb__0", "bcb__0"], [str] * 2, ["%s"] * 2)
assert t.getColNames() == ["abb__0", "bcb__0"]
t.removePostfixes()
assert t.getColNames() == ["abb", "bcb"]
t.removePostfixes("bb", "cb")
assert t.getColNames() == ["a", "b"]
t = Table._create(["abb__0", "bcb__0", "abb"], [str] * 3, ["%s"] * 3)
with pytest.raises(Exception) as e:
t.removePostfixes()
print(e.value, file=regtest)
def test_removePostfixes(regtest):
t = Table._create(["abb__0", "bcb__0"], [str] * 2, ["%s"] * 2)
assert t.getColNames() == ["abb__0", "bcb__0"]
t.removePostfixes()
assert t.getColNames() == ["abb", "bcb"]
t.removePostfixes("bb", "cb")
assert t.getColNames() == ["a", "b"]
t = Table._create(["abb__0", "bcb__0", "abb"], [str] * 3, ["%s"] * 3)
with pytest.raises(Exception) as e:
t.removePostfixes()
print(e.value, file=regtest)
def testSupportedPostfixes():
names = "mz mzmin mzmax mz0 mzmin0 mzmax0 mz1 mzmax1 mzmin__0 mzmax__0 mz__0 "\
"mzmax3 mz4 mzmin4".split()
t = Table._create(names, [float] * len(names), [])
assert len(t.supportedPostfixes(["mz"])) == len(names)
assert t.supportedPostfixes(["mz", "mzmin"]) == ["", "0", "4", "__0"]
assert t.supportedPostfixes(["mz", "mzmin", "mzmax"]) == ["", "0", "__0"]
def testSupportedPostfixes():
names = "mz mzmin mzmax mz0 mzmin0 mzmax0 mz1 mzmax1 mzmin__0 mzmax__0 mz__0 "\
"mzmax3 mz4 mzmin4".split()
t = Table._create(names, [float] * len(names), [None] * len(names))
assert len(t.supportedPostfixes(["mz"])) == len(names)
assert t.supportedPostfixes(["mz", "mzmin"]) == ["", "0", "4", "__0"]
assert t.supportedPostfixes(["mz", "mzmin", "mzmax"]) == ["", "0", "__0"]
def test_removePostfixes():
t = Table._create(["abb__0", "bcb__0"], [str] * 2, ["%s"] * 2)
assert t.getColNames() == ["abb__0", "bcb__0"]
t.removePostfixes()
assert t.getColNames() == ["abb", "bcb"]
t.removePostfixes("bb", "cb")
assert t.getColNames() == ["a", "b"]
try:
t.print_()
t.removePostfixes("a", "b")
t.print_()
except:
pass
else:
assert False, "expected exception"
def testMixedRows():
names = """rt rtmin rtmax rt__1 rtmin__1 rtmax__1
mz mzmin mzmax mz__1 mzmin__1 mzmax__1
rt__0 rtmin__0 rtmax__0
mz__0 mzmin__0 mzmax__0
rt__2 rtmin__2""".split()
names = [n.strip() for n in names]
tab = Table._create(names, [float]*len(names), ["%f"] * len(names))
model = TableModel(tab, None)
#assert model.postfixes == [ "", "__0", "__1", "__2"], model.postfixes
assert model.table.supportedPostfixes(["rtmin", "rt"]) == ["", "__0", "__1", "__2"]
assert model.table.supportedPostfixes(["mz", "rt", "mzmin"]) == ["", "__0", "__1"]
assert model.table.supportedPostfixes(["mz", "rt", "x"]) == []
