def __init__(self, eegplot, packstart=None, packend=None):
gtk.Window.__init__(self)
Observer.__init__(self)
self.set_size_request(*self._size)
self.eegplot = eegplot
self.eeg = eegplot.get_eeg()
self.eoi = eegplot.get_eoi()
self._filterButter = Filter(self)
self._filter = FilterBase() # no filtering
self._filterGM = self.eegplot.filterGM
vbox = gtk.VBox()
vbox.show()
vbox.set_spacing(3)
self.add(vbox)
if packstart is not None:
for w, expand, fill in packstart:
vbox.pack_start(w, expand, fill)
self.fig = Figure()
self.axes = self.fig.add_subplot(111)
self.canvas = FigureCanvas(self.fig) # a gtk.DrawingArea
self.canvas.set_size_request(0,0)
self.canvas.show()
vbox.pack_start(self.canvas, True, True)
if packend is not None:
for w, expand, fill in packend:
vbox.pack_start(w, expand, fill)
self.toolbar = self.make_toolbar()
self.toolbar.show()
vbox.pack_end(self.toolbar, False, False)
self.set_title(self._title)
self.set_border_width(10)
def remove(*args):
Observer.observers.remove(self)
self.connect('delete-event', remove)
self._init() # last call before make_plot
self.make_plot() #last line!
def __init__(self, eegplot):
gtk.Window.__init__(self)
Observer.__init__(self)
self.set_size_request(300, 300)
self.eegplot = eegplot
self.eeg = eegplot.get_eeg()
self.eoi = eegplot.get_eoi()
vbox = gtk.VBox()
vbox.show()
vbox.set_spacing(3)
self.add(vbox)
#print "EmbedWin.__init__(): making GLExtVTKRenderWindowInteractor"
interactor = GtkGLExtVTKRenderWindowInteractor()
vbox.pack_start(interactor, True, True)
toolbar = self.make_toolbar()
toolbar.show()
vbox.pack_start(toolbar, False, False)
#print "EmbedWin.__init__(): to interactor: show(), Initialize(), Start(), AddObserver('ExitEvent', ...)"
interactor.show()
interactor.Initialize()
interactor.Start()
interactor.AddObserver("ExitEvent", lambda o,e,x=None: x)
self.renderer = vtk.vtkRenderer()
#print "EmbedWin.__init__(): "
interactor.GetRenderWindow().AddRenderer(self.renderer)
self.interactor = interactor
self.set_title("Embedding Window")
self.set_border_width(10)
self.scatterActor = None
self.make_embed() #last line!
def __init__(self, eegplot):
gtk.Window.__init__(self)
Observer.__init__(self)
self.set_size_request(300, 300)
self.eegplot = eegplot
self.eeg = eegplot.get_eeg()
self.eoi = eegplot.get_eoi()
vbox = gtk.VBox()
vbox.show()
vbox.set_spacing(3)
self.add(vbox)
#print "EmbedWin.__init__(): making GLExtVTKRenderWindowInteractor"
interactor = GtkGLExtVTKRenderWindowInteractor()
vbox.pack_start(interactor, True, True)
toolbar = self.make_toolbar()
toolbar.show()
vbox.pack_start(toolbar, False, False)
#print "EmbedWin.__init__(): to interactor: show(), Initialize(), Start(), AddObserver('ExitEvent', ...)"
interactor.show()
interactor.Initialize()
interactor.Start()
interactor.AddObserver("ExitEvent", lambda o, e, x=None: x)
self.renderer = vtk.vtkRenderer()
#print "EmbedWin.__init__(): "
interactor.GetRenderWindow().AddRenderer(self.renderer)
self.interactor = interactor
self.set_title("Embedding Window")
self.set_border_width(10)
self.scatterActor = None
self.make_embed() #last line!
def __init__(self, eoi, freq, t, data, trial_length, offset,
window_length):
gtk.Window.__init__(self)
Observer.__init__(self)
self.choose_file()
self.channels = eoi
self.selected_channels = []
# wavelets is a dict from name to np array
self.wavelets = {}
self.selected_wavelets = []
self.eegfreq = freq
self.t = t # an array of ms exactly indexed into self.data[0]
self.trial_length = trial_length
self.offset = offset
print t
print data.shape
print self.channels
self.data = data
self.fig = Figure(figsize=(15, 15), dpi=72)
self.canvas = FigureCanvas(self.fig) # a gtk.DrawingArea
self.canvas.show()
self.resize(700, 512)
self.set_title('Wavelet Runner')
vbox = gtk.VBox()
vbox.show()
self.add(vbox)
buttonChans = gtk.Button("Chans")
buttonChans.show()
buttonChans.connect('clicked', self.load_chans)
buttonWB = gtk.Button("Wavelet Toolbox")
buttonWB.show()
buttonWB.connect('clicked', self.load_wavelets)
buttonPlot = gtk.Button(stock=gtk.STOCK_EXECUTE)
buttonPlot.show()
buttonPlot.connect('clicked', self.execute)
lwindow = gtk.Label()
lwindow.set_text("window in ms")
lwindow.show()
self.window_length_entry = gtk.Entry()
self.window_length_entry.set_text(
str((window_length / float(self.eegfreq)) * 1000))
self.window_length_entry.show()
lmod = gtk.Label()
lmod.set_text("modval")
lmod.show()
self.modval_entry = gtk.Entry()
self.modval_entry.set_text('7.0')
self.modval_entry.show()
hbox = gtk.HBox()
hbox.show()
hbox.set_spacing(3)
vbox.pack_start(hbox, False, False)
hbox.pack_start(buttonChans, False, False)
hbox.pack_start(buttonWB, False, False)
hbox.pack_start(buttonPlot, False, False)
hbox.pack_start(lwindow, False, False)
hbox.pack_start(self.window_length_entry, False, False)
hbox.pack_start(lmod, False, False)
hbox.pack_start(self.modval_entry, False, False)
self.statBar = gtk.Label()
self.statBar.set_alignment(0, 0)
self.statBar.show()
self.progBar = gtk.ProgressBar()
self.progBar.set_orientation(0) # bottom-to-top
self.progBar.set_fraction(0)
self.progBar.show()
vbox.pack_start(self.canvas, True, True)
vbox.pack_start(self.statBar, False, False)
vbox.pack_start(self.progBar, False, False)
def __init__(self,
gridManager,
X,
channels,
amp,
addview3,
view3,
start_time=None,
end_time=None):
ScalarMapper.__init__(self, gridManager)
gtk.Window.__init__(self)
Observer.__init__(self)
self.resize(512, 570)
self.set_title('Array data')
self.view3 = view3
self.addview3 = addview3
self.channels = channels
self.amp = amp
self.trodes = [(gname, gnum) for cnum, gname, gnum in amp]
self.X = X
self.ax = None
self.numChannels, self.numSamples = X.shape
self.addview3destroy = False
self.time_in_secs = False
self.start_time = None
self.end_time = None
if ((start_time != None) & (end_time != None)):
self.time_in_secs = True
self.start_time = start_time
self.end_time = end_time
vbox = gtk.VBox()
vbox.show()
self.add(vbox)
self.fig = self.make_fig(start_time, end_time)
if self.addview3:
button = gtk.Button('Remove from View3')
button.show()
#button.set_active(False)
vbox.pack_start(button, False, False)
button.connect('clicked', self.view3_remove)
if self.addview3destroy == False:
self.broadcast(Observer.ARRAY_CREATED, self.fig, True, False)
self.addview3Button = button
self.canvas = FigureCanvas(self.fig) # a gtk.DrawingArea
self.canvas.show()
vbox.pack_start(self.canvas, True, True)
hbox = gtk.HBox()
hbox.show()
vbox.pack_start(hbox, False, False)
label = gtk.Label('Sample num')
label.show()
hbox.pack_start(label, False, False)
scrollbar = gtk.HScrollbar()
scrollbar.show()
hbox.pack_start(scrollbar, True, True)
if (self.time_in_secs == True):
scrollbar.set_range(start_time, end_time)
#scrollbar.set_increments(1,1)
print "set_increments(%f, %f)" % (
(end_time - start_time) / float(self.numSamples),
(end_time - start_time) / float(self.numSamples))
scrollbar.set_increments(
(end_time - start_time) / float(self.numSamples),
(end_time - start_time) / float(self.numSamples))
scrollbar.set_value(start_time + (end_time - start_time) / 2.0)
else:
scrollbar.set_range(0, self.numSamples - 1)
scrollbar.set_increments(1, 1)
scrollbar.set_value(self.numSamples / 2.0)
scrollbar.connect('value_changed', self.set_sample_num)
self.scrollbarIndex = scrollbar
self.numlabel = gtk.Label(str(scrollbar.get_value()))
self.numlabel.show()
hbox.pack_start(self.numlabel, False, False)
hbox2 = gtk.HBox()
hbox2.show()
toolbar = NavigationToolbar(self.canvas, self)
toolbar.show()
hbox2.pack_start(toolbar, True, True)
button = gtk.Button('Coh. Here')
button.show()
hbox2.pack_start(button, False, False)
button.connect('clicked', self.coh_here)
vbox.pack_start(hbox2, False, False)
self.set_sample_num(scrollbar)
self.connect("destroy", self.on_destroy)
def __init__(self, gridManager, X, channels, amp, addview3, view3, start_time=None, end_time=None):
ScalarMapper.__init__(self, gridManager)
gtk.Window.__init__(self)
Observer.__init__(self)
self.resize(512,570)
self.set_title('Array data')
self.view3 = view3
self.addview3 = addview3
self.channels = channels
self.amp = amp
self.trodes = [(gname, gnum) for cnum, gname, gnum in amp]
self.X = X
self.ax = None
self.numChannels, self.numSamples = X.shape
self.addview3destroy = False
self.time_in_secs = False
self.start_time = None
self.end_time = None
if ((start_time != None) & (end_time != None)) :
self.time_in_secs = True
self.start_time = start_time
self.end_time = end_time
vbox = gtk.VBox()
vbox.show()
self.add(vbox)
self.fig = self.make_fig(start_time, end_time)
if self.addview3:
button = gtk.Button('Remove from View3')
button.show()
#button.set_active(False)
vbox.pack_start(button, False, False)
button.connect('clicked', self.view3_remove)
if self.addview3destroy == False:
self.broadcast(Observer.ARRAY_CREATED, self.fig, True, False)
self.addview3Button = button
self.canvas = FigureCanvas(self.fig) # a gtk.DrawingArea
self.canvas.show()
vbox.pack_start(self.canvas, True, True)
hbox = gtk.HBox()
hbox.show()
vbox.pack_start(hbox, False, False)
label = gtk.Label('Sample num')
label.show()
hbox.pack_start(label, False, False)
scrollbar = gtk.HScrollbar()
scrollbar.show()
hbox.pack_start(scrollbar, True, True)
if (self.time_in_secs == True):
scrollbar.set_range(start_time, end_time)
#scrollbar.set_increments(1,1)
print "set_increments(%f, %f)" % ((end_time-start_time)/float(self.numSamples), (end_time-start_time)/float(self.numSamples))
scrollbar.set_increments((end_time-start_time)/float(self.numSamples), (end_time-start_time)/float(self.numSamples))
scrollbar.set_value(start_time + (end_time-start_time)/2.0)
else:
scrollbar.set_range(0, self.numSamples-1)
scrollbar.set_increments(1,1)
scrollbar.set_value(self.numSamples/2.0)
scrollbar.connect('value_changed', self.set_sample_num)
self.scrollbarIndex = scrollbar
self.numlabel = gtk.Label(str(scrollbar.get_value()))
self.numlabel.show()
hbox.pack_start(self.numlabel,False, False)
hbox2 = gtk.HBox()
hbox2.show()
toolbar = NavigationToolbar(self.canvas, self)
toolbar.show()
hbox2.pack_start(toolbar, True, True)
button = gtk.Button('Coh. Here')
button.show()
hbox2.pack_start(button, False, False)
button.connect('clicked', self.coh_here)
vbox.pack_start(hbox2, False, False)
self.set_sample_num(scrollbar)
self.connect("destroy", self.on_destroy)
def __init__(self):
Observer.__init__(self)
