Python get_mjob_data 예제들

예제 #1

파일: test_functional.py 프로젝트: minqing1/FALCON

def test_get_mjob_data():
    example_HPCdaligner = open(example_HPCdaligner_fn)
    result = f.get_mjob_data(
            example_HPCdaligner)
    assert result
    eq_(result[1], ['LAmerge -v raw_reads.1 L1.1.1 L1.1.2 && rm L1.1.1.las L1.1.2.las'])
    eq_(result[2], ['LAmerge -v raw_reads.2 L1.2.1 L1.2.2 ; rm L1.2.1.las L1.2.2.las'])

예제 #2

파일: test_functional.py 프로젝트: malonge/FALCON

def test_get_mjob_data():
    example_HPCdaligner = open(example_HPCdaligner_fn)
    result = f.get_mjob_data(
            example_HPCdaligner)
    assert result
    eq_(result[1], ['LAmerge -v raw_reads.1 L1.1.1 L1.1.2 && rm L1.1.1.las L1.1.2.las'])
    eq_(result[2], ['LAmerge -v raw_reads.2 L1.2.1 L1.2.2 ; rm L1.2.1.las L1.2.2.las'])

예제 #3

파일: test_functional.py 프로젝트: PacificBiosciences/FALCON

def test_get_mjob_data():
    example_HPCdaligner = open(example_HPCdaligner_fn)
    result = f.get_mjob_data(
        example_HPCdaligner)
    assert result
    eq_(result[1], [
        'LAmerge -v raw_reads.1 raw_reads.1.raw_reads.1 raw_reads.1.raw_reads.2',
        'rm raw_reads.1.raw_reads.1.las raw_reads.1.raw_reads.2.las'])
    eq_(result[2], [
        'LAmerge -v raw_reads.2 raw_reads.2.raw_reads.1 raw_reads.2.raw_reads.2',
        'rm raw_reads.2.raw_reads.1.las raw_reads.2.raw_reads.2.las'])

예제 #4

파일: test_functional.py 프로젝트: pythseq/FALCON-1

def test_get_mjob_data():
    example_HPCdaligner = open(example_HPCdaligner_fn)
    result = f.get_mjob_data(example_HPCdaligner)
    assert result
    eq_(result[1], [
        'LAmerge -v raw_reads.1 raw_reads.1.raw_reads.1 raw_reads.1.raw_reads.2',
        'rm raw_reads.1.raw_reads.1.las raw_reads.1.raw_reads.2.las'
    ])
    eq_(result[2], [
        'LAmerge -v raw_reads.2 raw_reads.2.raw_reads.1 raw_reads.2.raw_reads.2',
        'rm raw_reads.2.raw_reads.1.las raw_reads.2.raw_reads.2.las'
    ])