def get_plot(self):
"""This method will do the following, if simulated data comes from MIT
physiobank:
- Determines file path of data text file
- Extract ecg data and store it in a list
"""
ecg_file = open(self.config.get('ecg', 'sim_type'), 'r')
done = 0
temp_list = []
self.ecg_list = []
ecg_file.readline()
ecg_file.readline()
while not done:
value = ecg_file.readline()
value = ecg_file.readline()
if value != '':
sample = value.split()
temp_list.append(float(sample[1]))
else:
done = 1
ecg_file.close()
temp_list = filters.besselfilter(temp_list)
self.ecg_list = temp_list[:7500]
return temp_list
def ecg_lead(self):
filtered = {}
if len(self.lead_temp['II'])>1:
for keys in self.lead_temp:
filtered[keys] = besselfilter(self.lead_temp[keys])
filtered['I'] = leadcalc.LI(self.lead_temp['II'],self.lead_temp['III'])
filtered['VR'] = leadcalc.LVR(self.lead_temp['II'],self.lead_temp['III'])
filtered['VL'] = leadcalc.LVL(self.lead_temp['II'],self.lead_temp['III'])
filtered['VF'] = leadcalc.LVF(self.lead_temp['II'],self.lead_temp['III'])
for keys in self.lead_ecg:
self.lead_ecg[keys].extend(filtered[keys])
for keys in self.lead_temp:
del self.lead_temp[keys][:]
def ecg_lead(self):
destuffed=[]
ecg_reply = self.get(self.logfile)
for i in range(len(ecg_reply)):
destuffed.append(self.byte_destuff(ecg_reply[i]))
for i in range(0,30):
ecg_data=self.reply_parser(destuffed[i])
self.ecg_leadI = leadcalc.LI(self.ecg_leadII,self.ecg_leadIII)
self.ecg_leadaVR = leadcalc.LVR(self.ecg_leadII,self.ecg_leadIII)
self.ecg_leadaVL = leadcalc.LVL(self.ecg_leadII,self.ecg_leadIII)
self.ecg_leadaVF = leadcalc.LVF(self.ecg_leadII,self.ecg_leadIII)
#return self.ecg_leadII
#return self.ecg_leadI, self.ecg_leadII, self.ecg_leadIII, \
# self.ecg_leadaVR, self.ecg_leadaVL, self.ecg_leadaVF,\
# self.ecg_leadV1, self.ecg_leadV2, self.ecg_leadV3,\
# self.ecg_leadV4, self.ecg_leadV5, self.ecg_leadV6
return besselfilter(self.ecg_leadI), besselfilter(self.ecg_leadII), besselfilter(self.ecg_leadIII), \
besselfilter(self.ecg_leadaVR), besselfilter(self.ecg_leadaVL), besselfilter(self.ecg_leadaVF),\
besselfilter(self.ecg_leadV1), besselfilter(self.ecg_leadV2), besselfilter(self.ecg_leadV3),\
besselfilter(self.ecg_leadV4), besselfilter(self.ecg_leadV5), besselfilter(self.ecg_leadV6)