def add_sequencelisting(request):
if request.method == 'POST':
form = SequenceListingForm(request.POST)
title_form = TitleForm(request.POST)
if form.is_valid() and title_form.is_valid():
filingDateFromForm = request.POST.get('filingDate')
# set to None bc the model does not handle properly empty string from form
fd = filingDateFromForm if filingDateFromForm else None
sl_instance = SequenceListing.objects.create(
fileName=request.POST.get('fileName'),
dtdVersion='1',
softwareName='prototype',
softwareVersion='0.1',
productionDate=timezone.now(
), #should be overwritten upon xml export
applicantFileReference=request.POST.get(
'applicantFileReference'),
IPOfficeCode=request.POST.get('IPOfficeCode'),
applicationNumberText=request.POST.get(
'applicationNumberText'),
# filingDate = request.POST.get('filingDate'),
filingDate=fd,
earliestPriorityIPOfficeCode=request.POST.get(
'earliestPriorityIPOfficeCode'),
earliestPriorityApplicationNumberText=request.POST.get(
'earliestPriorityApplicationNumberText'),
earliestPriorityFilingDate=request.POST.get(
'earliestPriorityFilingDate'),
applicantName=request.POST.get('applicantName'),
applicantNameLanguageCode=request.POST.get(
'applicantNameLanguageCode'),
applicantNameLatin=request.POST.get('applicantNameLatin'),
inventorName=request.POST.get('inventorName'),
inventorNameLanguageCode=request.POST.get(
'inventorNameLanguageCode'),
inventorNameLatin=request.POST.get('inventorNameLatin'),
)
sl_instance.save()
tcd = title_form.cleaned_data
title_instance = Title(
sequenceListing=sl_instance,
inventionTitle=tcd['inventionTitle'],
inventionTitleLanguageCode=tcd['inventionTitleLanguageCode'])
title_instance.save()
return HttpResponseRedirect(
reverse('sequencelistings:edit_seql', args=(sl_instance.pk, )))
else:
form = SequenceListingForm()
title_form = TitleForm()
return render(request, 'sequencelistings/add_sequencelisting.html', {
'form': form,
'title_form': title_form
})
def custom_form_view(request):
if request.method == 'POST':
form = TitleForm(request.POST)
if form.is_valid():
# form.save()
return redirect('/forms')
else:
form = TitleForm()
time.sleep(2)
return render(request, 'forms/form.html', {'form': form.as_p(),
'action': '/forms/custom'})
def add_title():
"""
Add a title to the database
"""
check_admin()
add_title = True
form = TitleForm()
if form.validate_on_submit():
title = Title(name=form.name.data)
try:
# add title to the database
db.session.add(title)
db.session.commit()
flash('You have successfully added a new title.')
except:
# in case title name already exists
flash('Error: title name already exists.')
# redirect to titles page
return redirect(url_for('admin.list_titles'))
# load title template
return render_template('admin/titles/title.html',
action="Add",
add_title=add_title,
form=form,
title="Add Title")
def edit_title(id):
"""
Edit a title
"""
check_admin()
add_title = False
title = Title.query.get_or_404(id)
form = TitleForm(obj=title)
if form.validate_on_submit():
title.name = form.name.data
db.session.commit()
flash('You have successfully edited the title.')
# redirect to the titles page
return redirect(url_for('admin.list_titles'))
form.name.data = title.name
return render_template('admin/titles/title.html',
action="Edit",
add_title=add_title,
form=form,
title_edit=title,
title="Edit Title")
def add_title(request, pk):
if request.method == 'POST':
form = TitleForm(request.POST)
if form.is_valid():
sl = SequenceListing.objects.get(pk=pk)
cd = form.cleaned_data
title_instance = Title(
sequenceListing=sl,
inventionTitle=cd['inventionTitle'].encode('utf-8'),
inventionTitleLanguageCode=cd['inventionTitleLanguageCode'])
title_instance.save()
return HttpResponseRedirect(
reverse('sequencelistings:edit_seql', args=(pk, )))
else:
form = TitleForm()
return render(request, 'sequencelistings/add_title.html', {
'form': form,
'pk': pk
})
def model_parameters(request):
errormsg = ""
if request.method == 'POST':
titleform = TitleForm(request.POST)
outvarform = OutputVarForm(request.POST)
resform = ResultsForm(request.POST)
tstepform = TimeStep(request.POST)
outstepform = OutStep(request.POST)
durform = Duration(request.POST)
initcondform = InitConds(request.POST)
initcondvalform = InitValue(request.POST)
tidalflatsform = TidalFlats(request.POST)
opttidalflatsform = OptTidalFlats(request.POST)
optliqbndryform = OptLiquidBndry(request.POST)
tidaldbform = TidalDatabase(request.POST)
autotuneform = AutoTune(request.POST)
autotuneoptsform = AutoTuneOpts(request.POST, request.FILES)
bottomfric = BottomFric(request.POST)
mobilealert = MobileAlert(request.POST)
if tstepform.is_valid() and outvarform.is_valid(
) and outstepform.is_valid() and durform.is_valid(
) and initcondform.is_valid() and optliqbndryform.is_valid():
postitems = {}
#autotuneoptsform.save()
mytitle = request.POST['title']
outvars = request.POST.getlist('outputvar')
for key, value in request.POST.items():
print(key, value)
postitems[key] = value
postitems['meshfile'] = request.session.get('meshfile', None)
postitems['bcfile'] = request.session.get('bcfile', None)
postitems['outputvar'] = outvars
mycasfile = CASFILE(postitems)
mycasfile.writeCasfile()
if 'autocalib' in postitems:
if postitems['autocalib'] == "1":
if autotuneoptsform.is_valid():
autotuneoptsform.save()
content = request.FILES['obsfldr']
cwd = os.getcwd()
dirname = cwd + "\\documents\\"
zippath = dirname + str(content)
zipobj = zipfile.ZipFile(zippath)
zipobj.extractall(dirname)
zipobj.close()
os.remove(zippath)
else:
errormsg = "Please fill in all the fields."
else:
titleform = TitleForm()
outvarform = OutputVarForm()
resform = ResultsForm()
tstepform = TimeStep()
outstepform = OutStep()
durform = Duration()
initcondform = InitConds()
initcondvalform = InitValue()
tidalflatsform = TidalFlats({'tidalflats': 'YES'})
opttidalflatsform = OptTidalFlats({
'opttidalflats': '1',
'optnegdepths': '1'
})
optliqbndryform = OptLiquidBndry()
tidaldbform = TidalDatabase()
autotuneform = AutoTune()
autotuneoptsform = AutoTuneOpts()
bottomfric = BottomFric()
mobilealert = MobileAlert()
geodata = request.session.get('my_data', None)
meshcentre = request.session.get('centre', None)
bndrysgeojson = request.session.get('bndrysgeojson')
northbndry = json.dumps(bndrysgeojson['northbndry'])
southbndry = json.dumps(bndrysgeojson['southbndry'])
return render(request, 'runtide/modelforms.html', locals())