tracks = [tr[0] for tr in a[0]]
#tracks = tracks-np.concatenate(tracks,axis=0)
lentra = [len(t) for t in tracks]
colors = np.random.rand(np.sum(lentra),4)
#colors[:,3]=0.9
"""
streamlines = Line('fornix', tracks, colors, line_width=2)
from fos import Window, Region
from fos.actor.axes import Axes
from fos.actor.text import Text3D
title = 'Bundle Picker'
w = Window(caption=title, width=1200, height=800, bgcolor=(0., 0., 0.2))
region = Region(regionname='Main',
extent_min=np.array([-5.0, -5, -5]),
extent_max=np.array([5, 5, 5]))
ax = Axes(name="3 axes", linewidth=2.0)
vert = np.array([[2.0, 3.0, 0.0]], dtype=np.float32)
ptr = np.array([[.2, .2, .2]], dtype=np.float32)
tex = Text3D("Text3D", vert, "Reg", 10, 2, ptr)
region.add_actor(ax)
region.add_actor(tex)
region.add_actor(streamlines)
#w.screenshot( 'red.png' )
w.add_region(region)
w.refocus_camera()
affine = None
data = np.zeros((256, 128, 32), np.uint8)
volume = np.zeros(data.shape + (3, ))
volume[..., 0] = data.copy()
volume[..., 1] = data.copy()
volume[..., 2] = data.copy()
volume = volume.astype(np.ubyte)
volume[..., :] = (255, 0, 0)
#volume[] =
print volume.shape, volume.min(), volume.max()
window = Window()
region = Region()
#volume = data
tex = Texture3D('Buzz', volume, affine)
w, h, d = volume.shape[:-1]
depindex = 100
dep = (0.5 + depindex) / np.float(d)
texcoords = np.array([[dep, 0, 0], [dep, 0, 1], [dep, 1, 1], [dep, 1, 0]])
vertcoords = np.array([[-w / 2., -h / 2., 0.], [-w / 2., h / 2., 0.],
[w / 2., h / 2., 0.], [w / 2, -h / 2., 0]])
tex.update_quad(texcoords, vertcoords)
ax = Axes(name="3 axes", linewidth=2.0)
vert = np.array([[2.0, 3.0, 0.0]], dtype=np.float32)
ptr = np.array([[.2, .2, .2]], dtype=np.float32)
