def _process_initialize_ges(self, message):
print_with_rank(self.num, "message: " + str(message))
entries = message[1]
for details in entries:
algo_name = details["algorithm"]
entity_name = details["entity_name"]
radius = details["radius"]
soma_xyz = details["soma_xyz"]
new_front = Front(entity_name,algo_name,soma_xyz,radius,\
0,0) # 0: pathlength, 0: order
new_front.soma_pos = soma_xyz
# self.fronts.append(new_front)
# # 2014-02-19: in principle the "all_contained" can be deleted once
# # I include the diameters in all constellations
# self.all_contained_entities[entity_name] = []
# self.all_contained_entities[entity_name].append(new_front)
# 2014-08-06
if entity_name in self.dynamic_constellation:
print "Help! I am overwriting something"
time.sleep(10)
self.dynamic_constellation[entity_name] = set()
self.dynamic_constellation[entity_name].add(
new_front) #append((soma_xyz,radius))
self.active_fronts.append(new_front)
def NondominatedSorting(self):
f1 = Front()
for chromosome in self.chromosomes:
if chromosome.is_Rank1():
f1.answers.append(chromosome)
self.fronts.append(f1)
fi = f1
a = 1
while len(fi.answers) > 0:
q = []
for answer in fi.answers:
for dominatedPoint in answer.dominatedPoints:
dominatedPoint.beingdominatedCount -= 1
if dominatedPoint.beingdominatedCount == 0:
dominatedPoint.rank = a + 1
self.chromosomes[
dominatedPoint.populationID].rank = a + 1
q.append(dominatedPoint)
fi = Front()
for n in range(len(q)):
fi.answers.append(q[n])
if fi.answers:
self.fronts.append(fi)
a += 1
def _process_initialize_ges(self,message):
print_with_rank(self.num,"message: " + str(message))
entries = message[1]
for details in entries :
algo_name = details["algorithm"]
entity_name = details["entity_name"]
radius = details["radius"]
soma_xyz = details["soma_xyz"]
new_front = Front(entity_name,algo_name,soma_xyz,radius,\
0,0) # 0: pathlength, 0: order
new_front.soma_pos = soma_xyz
# self.fronts.append(new_front)
# # 2014-02-19: in principle the "all_contained" can be deleted once
# # I include the diameters in all constellations
# self.all_contained_entities[entity_name] = []
# self.all_contained_entities[entity_name].append(new_front)
# 2014-08-06
if entity_name in self.dynamic_constellation :
print "Help! I am overwriting something"
time.sleep(10)
self.dynamic_constellation[entity_name] = set()
self.dynamic_constellation[entity_name].add(new_front)#append((soma_xyz,radius))
self.active_fronts.append(new_front)
def create_front(repoUrl):
if repoUrl.startswith("boar://"):
front = client.connect(repoUrl)
front.isRemote = True
else:
front = Front(Repo(repoUrl))
front.isRemote = False
return front
def _summarize_constellation(self, c):
summarized_constellation = {}
# 2014-01-19, 2014-08-06
for key in c:
temp = [np.mean(c[key], axis=0)]
temp2 = []
for t in temp:
temp2.append((t, 0))
#print "summary for key=",key,'=>',temp2
sum_front = Front(key, "", temp2[0][0], 0, 0, 0)
summarized_constellation[key] = set([sum_front])
#print_with_rank(self.num,"summarized: "+str(summarized_constellation))
return summarized_constellation
def _get_sub_substrate(self, boundary): # get subvolume substrate
sub_substrate = {}
b0 = np.array(boundary[0])
b1 = np.array(boundary[1])
for entity in self.substrate:
print("checking entity: ", entity, ", boundary: ", boundary)
# 2014-08-08, make all internals sets of fronts.. bit redundant memory wise, but easy for administration
sub_substrate[entity] = set()
for ppoint in self.substrate[entity]:
point = ppoint[0]
t_front = Front(None, None, point, ppoint[1], 0, 0)
sub_substrate[entity].add(t_front)
#time.sleep(1)
if len(sub_substrate[entity]) == 0:
sub_substrate.pop(entity, None)
return sub_substrate
def connect(repourl):
if os.getenv("BOAR_TEST_REMOTE_REPO") == "1":
# Force boar to use the remote communication mechanism even for local repos.
repourl = localize(repourl)
elif os.getenv("BOAR_TEST_REMOTE_REPO") == "2":
# Force boar to use the remote communication mechanism over ssh
repourl = ssh_localize(repourl)
m = re.match(BOAR_URL_PATTERN, repourl)
if not m:
return Front(user_friendly_open_local_repository(repourl))
transporter = m.group(2)
if transporter == None or transporter == "tcp":
front = connect_tcp(repourl)
elif transporter == "ssh":
front = connect_ssh(repourl)
elif transporter == "local":
front = connect_local(repourl)
else:
raise UserError("No such transporter: '%s'" % transporter)
assert front
return front
class Coordinates():
# For doors
levels = [0, 4, 7]
centers = [-6.25, -4.75, -3.25, -1.75, 0, 1.75, 3.25, 4.75, 6.25]
stct = Structure()
tops = stct.get_tops()
front = Front().get_front()
doors_objects = {0: {}, 4: {}, 7: {}}
doors = []
left_doors = []
for level in levels:
for center in centers:
door = Door(level, center)
doors_objects[level][center] = door
doors.append(door.get_door())
left_doors.append(door.get_left_door())
# tops door
lvl, ctr = 10, 0
levels.append(lvl)
doors_objects[lvl] = {}
door = Door(lvl, ctr)
doors_objects[lvl][ctr] = door
doors.append(door.get_door())
chairs = []
c_coordsT = [
(-5.5, 0, 9.3),
(-4, 0, -15.7),
(0, 0, -15.7),
(4, 0, -15.7),
(-2, 0, -12.7),
(2, 0, -12.7), # 0 degrees
(-4.7, 0, -15),
(-0.7, 0, -15),
(3.3, 0, -15),
(-2.7, 0, -12),
(1.3, 0, -12),
(-6.2, 0, -1), # 90 degrees
(-3.3, 0, -15),
(0.7, 0, -15),
(4.7, 0, -15),
(-1.3, 0, -12),
(2.7, 0, -12), # -90 degrees
(-4, 0, -14.3),
(0, 0, -14.3),
(4, 0, -14.3),
(-2, 0, -11.3),
(2, 0, -11.3)
] # 180 degrees
c_coords = [(0, 0, 0)] * 22
for cc in c_coords:
chair = Chair(cc).get_chair()
chairs.append(chair)
chairs2 = []
c2_coordsT = [(5.5, 0, 6), (-5.5, 0, -6), (-5, 0, -6), (-4, 0, -6),
(-3.5, 0, -6), (-2.5, 0, -6), (-2, 0, -6), (1.5, 0, -6),
(2.5, 0, -6), (3.5, 0, -6), (4.5, 0, -6), (5.5, 0, -6)]
c2_coords = [(0, 0, 0)] * 12
for cc2 in c2_coords:
chair = Chair2(cc2).get_chair()
chairs2.append(chair)
tables = []
ct_coordsT = [(-5.5, 0, 10), (-4, 0, -15), (0, 0, -15), (4, 0, -15),
(-2, 0, -12), (2, 0, -12), (-5.5, 0, -1)]
ct_coords = [(0, 0, 0)] * 7
for ct in ct_coords:
table = Table(ct).get_table()
tables.append(table)
bookcases = []
cbc_coordsT = [(3.5, 0, 3), (3.5, 4, 3), (-6.6, 0, -6.5), (-6.6, 0, -9.5),
(-6.6, 0, -12.5), (-6.6, 0, -15.5), (6.6, 0, -6.5),
(6.6, 0, 15.5), (6.6, 0, 12.5), (6.6, 0, 9.5),
(6.6, 0, 6.5), (6.6, 0, -9.5), (6.6, 0, -12.5),
(-6.5, 0, 6.5), (-6.5, 0, 3.7), (-6.5, 0, 1.3),
(6.6, 0, -15.5), (-6.6, 0, 14), (-1.5, 0, -19),
(1.5, 0, -19)]
cbc_coords = [(0, 0, 0)] * 20
for cbc in cbc_coords:
bookcase = Bookcase(cbc).get_bookcase()
bookcases.append(bookcase)
bookcases2 = []
cbc2_coordsT = [(3.5, 0, 1), (3.5, 4, 1), (-5.5, 0, -19), (6.5, 0, -19),
(-3.5, 0, -19), (4.5, 0, -19), (-4.2, 0, 1)]
cbc2_coords = [(0, 0, 0)] * 7
for cbc2 in cbc2_coords:
bookcase2 = Bookcase2(cbc2).get_bookcase()
bookcases2.append(bookcase2)
walls = []
cw_coords = [(0, 0, 0)]
for cw in cw_coords:
wall = Wall(cw).get_wall()
walls.append(wall)
floors = []
cf_coords = [(0, 0, 0)]
for cf in cf_coords:
floor = Floor(cf).get_floor()
floors.append(floor)