Python variants_equal_to_ignore_order 예제들

예제 #1

파일: filter_variants_test.py 프로젝트: cienciadedadosebigdata/gcp-variant-transforms

 def _run_filter_pipeline(self, variants, expected, reference_names=None):
     filtered_variants = (
         self.pipeline
         | Create(variants)
         | 'FilterVariants' >>
         filter_variants.FilterVariants(reference_names=reference_names))
     assert_that(filtered_variants,
                 asserts.variants_equal_to_ignore_order(expected))
     self.pipeline.run()

예제 #2

 def test_merge_variants(self):
   variant_merger = move_to_calls_strategy.MoveToCallsStrategy(
       '^A1$', False, False)
   variant_list, merged_variant = self._get_sample_merged_variants()
   unmerged_variant_list = self._get_sample_unmerged_variants()
   pipeline = TestPipeline()
   merged_variants = (
       pipeline
       | Create(variant_list + unmerged_variant_list, reshuffle=False)
       | 'MergeVariants' >> merge_variants.MergeVariants(variant_merger))
   assert_that(merged_variants,
               asserts.variants_equal_to_ignore_order([merged_variant] +
                                                      unmerged_variant_list))
   pipeline.run()