def infer_distribution(self): if self.is_categorical: distribution = self.data_dropna.value_counts() for value in set(self.distribution_bins) - set(distribution.index): distribution[value] = 0 distribution.sort_index(inplace=True) self.distribution_probabilities = normalize_given_distribution(distribution) self.distribution_bins = np.array(distribution.index) else: distribution = np.histogram(self.data_dropna_len, bins=self.histogram_size) self.distribution_bins = distribution[1][:-1] self.distribution_probabilities = normalize_given_distribution(distribution[0])
def infer_distribution(self): if self.is_categorical: histogram = self.data_dropna.value_counts() for value in set(self.distribution_bins) - set(histogram.index): histogram[value] = 0 histogram = histogram[self.distribution_bins] self.distribution_probabilities = normalize_given_distribution( histogram) else: histogram, _ = np.histogram(self.data_dropna, bins=self.distribution_bins) self.distribution_probabilities = normalize_given_distribution( histogram)
def _construct_conditional_probabilities(self, bayesian_network, encoded_dataset): k = len(bayesian_network[-1][1]) conditional_distributions = {} # first k+1 attributes root = bayesian_network[0][1][0] kplus1_attributes = [root] for child, _ in bayesian_network[:k]: kplus1_attributes.append(child) freqs_of_kplus1_attributes = self._get_attribute_frequency_counts( kplus1_attributes, encoded_dataset) # get distribution of root attribute root_marginal_freqs = freqs_of_kplus1_attributes.loc[:, [ root, 'count' ]].groupby(root).sum()['count'] conditional_distributions[root] = normalize_given_distribution( root_marginal_freqs).tolist() for idx, (child, parents) in enumerate(bayesian_network): conditional_distributions[child] = {} if idx < k: stats = freqs_of_kplus1_attributes.copy().loc[:, parents + [child, 'count']] else: stats = self._get_attribute_frequency_counts( parents + [child], encoded_dataset) stats = DataFrame( stats.loc[:, parents + [child, 'count']].groupby(parents + [child]).sum()) if len(parents) == 1: for parent_instance in stats.index.levels[0]: dist = normalize_given_distribution( stats.loc[parent_instance]['count']).tolist() conditional_distributions[child][str([parent_instance ])] = dist else: for parents_instance in product(*stats.index.levels[:-1]): dist = normalize_given_distribution( stats.loc[parents_instance]['count']).tolist() conditional_distributions[child][str( list(parents_instance))] = dist return conditional_distributions
def infer_distribution(self): histogram = self.data_dropna.value_counts() for attr_cat in set(self.distribution_bins) - set(histogram.index): histogram[attr_cat] = 0 histogram = histogram[self.distribution_bins] self.distribution_probabilities = normalize_given_distribution( histogram)
def infer_distribution(self): frequency_counts, _ = histogram(self.data_dropna, bins=self.distribution_bins) self.distribution_probabilities = normalize_given_distribution( frequency_counts)