def checkCandidate(candidate, results, peptide):
rna_complement = genome.transpose_rna(genome.reversecomplement(candidate))
rna = genome.transpose_rna(candidate)
if genome.encodeProtein(rna) == peptide:
results.append(candidate)
elif genome.encodeProtein(rna_complement) == peptide:
results.append(candidate)
import re
import genome
inFile=open('dataset_18_3.txt', 'r')
pattern='AUGGCCAUGGCGCCCAGAACUGAGAUCAAUAGUACCCGUAUUAACGGGUGA'
pattern=inFile.readline().strip()
print genome.encodeProtein(pattern)
