def filter_dists(ctx):
dbname = ctx.obj['dbname']
db = DB(dbname, ctx.obj['config'])
db.open()
infile = ctx.obj['infile']
outfile = ctx.obj['outfile']
max_dist = float(ctx.obj['max_dist'])
fd = FilterDists(db)
fd.filter(infile, outfile, max_dist)
db.close()
def generate_graphs(self, db, scale, table):
fd = FilterDists(db)
graph_file = self.graph_path(100)
if os.path.isfile(graph_file):
print('full graph file found: %s' % graph_file)
else:
print('generating: %s' % graph_file)
gg = GenGraph(db, outfile=graph_file, table=table)
gg.generate()
for per in self.percent_range():
if per < 100:
filtered_file = self.graph_path(per)
print('generating: %s' % filtered_file)
max_dist = self.dist(per, scale)
fd.filter(graph_file, filtered_file, max_dist)
print('done.')