def delete_pod(component_label, settings, custom_yaml_filename=None):
deployment_target = settings["DEPLOY_TO"]
yaml_filename = custom_yaml_filename or (component_label+".%(DEPLOY_TO_PREFIX)s.yaml")
if is_pod_running(component_label, deployment_target):
run(" ".join([
"kubectl delete",
"-f %(DEPLOYMENT_TEMP_DIR)s/deploy/kubernetes/"+component_label+"/"+yaml_filename,
]) % settings, errors_to_ignore=["not found"])
logger.info("waiting for \"%s\" to exit Running status" % component_label)
while is_pod_running(component_label, deployment_target):
time.sleep(5)
def delete_component(component, deployment_target=None):
"""Runs kubectl commands to delete any running deployment, service, or pod objects for the given component(s).
Args:
component (string): component to delete (eg. 'phenotips' or 'nginx').
deployment_target (string): value from DEPLOYMENT_TARGETS - eg. "minikube", "gcloud-dev", etc.
"""
if component == "cockpit":
run("kubectl delete rc cockpit", errors_to_ignore=["not found"])
elif component == "es-data":
run("kubectl delete StatefulSet es-data",
errors_to_ignore=["not found"])
elif component == "nginx":
run("kubectl delete -f https://raw.githubusercontent.com/kubernetes/ingress-nginx/master/deploy/mandatory.yaml"
)
run("kubectl delete deployments %(component)s" % locals(),
errors_to_ignore=["not found"])
run("kubectl delete services %(component)s" % locals(),
errors_to_ignore=["not found"])
pod_name = get_pod_name(component, deployment_target=deployment_target)
if pod_name:
run("kubectl delete pods %(pod_name)s" % locals(),
errors_to_ignore=["not found"])
logger.info("waiting for \"%s\" to exit Running status" % component)
while is_pod_running(component, deployment_target):
time.sleep(5)
# print services and pods status
run("kubectl get services" % locals(), verbose=True)
run("kubectl get pods" % locals(), verbose=True)
def delete_component(component, deployment_target=None):
"""Runs kubectl commands to delete any running deployment, service, or pod objects for the given component(s).
Args:
component (string): component to delete (eg. 'phenotips' or 'nginx').
deployment_target (string): value from DEPLOYMENT_TARGETS - eg. "minikube", "gcloud-dev", etc.
"""
if component == "cockpit":
run("kubectl delete rc cockpit", errors_to_ignore=["not found"])
elif component == "es-data":
run("kubectl delete StatefulSet es-data", errors_to_ignore=["not found"])
elif component == "nginx":
run("kubectl delete -f https://raw.githubusercontent.com/kubernetes/ingress-nginx/master/deploy/mandatory.yaml")
run("kubectl delete deployments %(component)s" % locals(), errors_to_ignore=["not found"])
run("kubectl delete services %(component)s" % locals(), errors_to_ignore=["not found"])
pod_name = get_pod_name(component, deployment_target=deployment_target)
if pod_name:
run("kubectl delete pods %(pod_name)s" % locals(), errors_to_ignore=["not found"])
logger.info("waiting for \"%s\" to exit Running status" % component)
while is_pod_running(component, deployment_target):
time.sleep(5)
# print services and pods status
run("kubectl get services" % locals(), verbose=True)
run("kubectl get pods" % locals(), verbose=True)
if wait_until_pod_is_ready:
sleep_until_pod_is_ready(component_label,
deployment_target=settings["DEPLOY_TO"])
def delete_pod(component_label,
settings,
async=False,
custom_yaml_filename=None):
deployment_target = settings["DEPLOY_TO"]
yaml_filename = custom_yaml_filename or (component_label +
".%(DEPLOY_TO_PREFIX)s.yaml")
if is_pod_running(component_label, deployment_target):
run(" ".join([
"kubectl delete",
"-f %(DEPLOYMENT_TEMP_DIR)s/deploy/kubernetes/" + component_label +
"/" + yaml_filename,
]) % settings,
errors_to_ignore=["not found"])
logger.info("waiting for \"%s\" to exit Running status" % component_label)
while is_pod_running(component_label, deployment_target) and not async:
time.sleep(5)
def create_vpc(gcloud_project, network_name):
run(
" ".join([
"-f %(DEPLOYMENT_TEMP_DIR)s/deploy/kubernetes/"+component_label+"/"+component_label+".%(DEPLOY_TO_PREFIX)s.yaml"
]) % settings)
if wait_until_pod_is_running:
sleep_until_pod_is_running(component_label, deployment_target=settings["DEPLOY_TO"])
if wait_until_pod_is_ready:
sleep_until_pod_is_ready(component_label, deployment_target=settings["DEPLOY_TO"])
def delete_pod(component_label, settings, async=False, custom_yaml_filename=None):
deployment_target = settings["DEPLOY_TO"]
yaml_filename = custom_yaml_filename or (component_label+".%(DEPLOY_TO_PREFIX)s.yaml")
if is_pod_running(component_label, deployment_target):
run(" ".join([
"kubectl delete",
"-f %(DEPLOYMENT_TEMP_DIR)s/deploy/kubernetes/"+component_label+"/"+yaml_filename,
]) % settings, errors_to_ignore=["not found"])
logger.info("waiting for \"%s\" to exit Running status" % component_label)
while is_pod_running(component_label, deployment_target) and not async:
time.sleep(5)
def create_vpc(gcloud_project, network_name):
run(" ".join([
#"gcloud compute networks create seqr-project-custom-vpc --project=%(GCLOUD_PROJECT)s --mode=custom"
"gcloud compute networks create %(network_name)s",
"--project=%(gcloud_project)s",
