scale_correction,
"scaled_swc_key":
morphology_to_s3(bucket, f"{prefix}/scaled_morphology.swc",
morphology),
"scaled_png_key":
morphology_png_to_s3(bucket, f"{prefix}/scaled_morphology.png",
morphology)
}
def main(token=None):
working_bucket = os.environ.get("WORKING_BUCKET")
reconstruction_id = os.environ.get("RECONSTRUCTION_ID")
run_prefix = os.environ.get("RUN_PREFIX")
inputs = collect_inputs(working_bucket, run_prefix, reconstruction_id)
outputs = compute_scale_correction.run_scale_correction(**inputs)
return put_outputs(
working_bucket,
run_prefix,
outputs["morphology_scaled"],
outputs["scale_transform"],
outputs["scale_correction"],
)
if __name__ == "__main__":
step_fns_ecs_harness(main)
def main():
step_fns_ecs_harness(plot_original)
def main():
step_fns_ecs_harness(landing)
def main():
step_fns_ecs_harness(run_depth_field)
def main():
step_fns_ecs_harness(run_tilt)
def main():
step_fns_ecs_harness(run_upright_transform)