예제 #1
0
 def __testDbExist(self, dbpath, tagname):
     if dbpath.startswith("sqlite_file:"):
         if not os.path.exists(dbpath.split("sqlite_file:")[1]):
             raise AllInOneError("could not find file: '%s'" %
                                 dbpath.split("sqlite_file:")[1])
         elif "\n" + tagname not in conddb("--db",
                                           dbpath.split("sqlite_file:")[1],
                                           "listTags"):
             raise AllInOneError("{} does not exist in {}".format(
                 tagname, dbpath))
예제 #2
0
    def __getConditions( self, theConfig, theSection ):
        conditions = []
        for option in theConfig.options( theSection ):
            if option in ("mp", "mp_alignments", "mp_deformations", "mp_APEs", "hp", "hp_alignments", "hp_deformations", "sm", "sm_alignments", "sm_deformations"):
                matches = [re.match(_, option) for _ in ("^(..)$", "^(..)_alignments$", "^(..)_deformations$", "^(..)_APEs$")]
                assert sum(bool(_) for _ in matches) == 1, option
                condPars = theConfig.get(theSection, option).split(",")
                condPars = [_.strip() for _ in condPars]
                if matches[0]:
                    alignments = True
                    deformations = True
                    APEs = {"hp": False, "mp": True}[option]
                elif matches[1]:
                    alignments = True
                    deformations = False
                    APEs = False
                    option = matches[1].group(1)
                elif matches[2]:
                    alignments = False
                    deformations = True
                    APEs = False
                    option = matches[2].group(1)
                elif matches[3]:
                    alignments = False
                    deformations = False
                    APEs = True
                    option = matches[3].group(1)
                else:
                    assert False

                if option == "mp":
                    if len(condPars) == 1:
                        number, = condPars
                        jobm = None
                    elif len(condPars) == 2:
                        number, jobm = condPars
                    else:
                        raise AllInOneError("Up to 2 arguments accepted for {} (job number, and optionally jobm index)".format(option))

                    folder = "/afs/cern.ch/cms/CAF/CMSALCA/ALCA_TRACKERALIGN/MP/MPproduction/{}{}/".format(option, number)
                    if not os.path.exists(folder):
                        raise AllInOneError(folder+" does not exist.")
                    folder = os.path.join(folder, "jobData")
                    jobmfolders = set()
                    if jobm is None:
                        for filename in os.listdir(folder):
                            if re.match("jobm([0-9]*)", filename) and os.path.isdir(os.path.join(folder, filename)):
                                jobmfolders.add(filename)
                        if len(jobmfolders) == 0:
                            raise AllInOneError("No jobm or jobm(number) folder in {}".format(folder))
                        elif len(jobmfolders) == 1:
                            folder = os.path.join(folder, jobmfolders.pop())
                        else:
                            raise AllInOneError(
                                                "Multiple jobm or jobm(number) folders in {}\n".format(folder)
                                                + ", ".join(jobmfolders) + "\n"
                                                + "Please specify 0 for jobm, or a number for one of the others."
                                               )
                    elif jobm == "0":
                        folder = os.path.join(folder, "jobm")
                        if os.path.exists(folder + "0"):
                            raise AllInOneError("Not set up to handle a folder named jobm0")
                    else:
                        folder = os.path.join(folder, "jobm{}".format(jobm))

                    dbfile = os.path.join(folder, "alignments_MP.db")
                    if not os.path.exists(dbfile):
                        raise AllInOneError("No file {}.  Maybe your alignment folder is corrupted, or maybe you specified the wrong jobm?".format(dbfile))

                elif option in ("hp", "sm"):
                    if len(condPars) == 1:
                        number, = condPars
                        iteration = None
                    elif len(condPars) == 2:
                        number, iteration = condPars
                    else:
                        raise AllInOneError("Up to 2 arguments accepted for {} (job number, and optionally iteration)".format(option))
                    folder = "/afs/cern.ch/cms/CAF/CMSALCA/ALCA_TRACKERALIGN2/HipPy/alignments/{}{}".format(option, number)
                    if not os.path.exists(folder):
                        raise AllInOneError(folder+" does not exist.")
                    if iteration is None:
                        for filename in os.listdir(folder):
                            match = re.match("alignments_iter([0-9]*).db", filename)
                            if match:
                                if iteration is None or int(match.group(1)) > iteration:
                                    iteration = int(match.group(1))
                        if iteration is None:
                            raise AllInOneError("No alignments in {}".format(folder))
                    dbfile = os.path.join(folder, "alignments_iter{}.db".format(iteration))
                    if not os.path.exists(dbfile):
                        raise AllInOneError("No file {}.".format(dbfile))

                    if "\nDeformations" not in conddb("--db", dbfile, "listTags"):
                        deformations = False  #so that hp = XXXX works whether or not deformations were aligned
                        if not alignments:    #then it's specified with hp_deformations, which is a mistake
                            raise AllInOneError("{}{} has no deformations".format(option, number))

                else:
                    assert False, option

                if alignments:
                    conditions.append({"rcdName": "TrackerAlignmentRcd",
                                       "connectString": "sqlite_file:"+dbfile,
                                       "tagName": "Alignments",
                                       "labelName": ""})
                if deformations:
                    conditions.append({"rcdName": "TrackerSurfaceDeformationRcd",
                                       "connectString": "sqlite_file:"+dbfile,
                                       "tagName": "Deformations",
                                       "labelName": ""})
                if APEs:
                    conditions.append({"rcdName": "TrackerAlignmentErrorExtendedRcd",
                                       "connectString": "sqlite_file:"+dbfile,
                                       "tagName": "AlignmentErrorsExtended",
                                       "labelName": ""})

            elif option.startswith( "condition " ):
                rcdName = option.split( "condition " )[1]
                condPars = theConfig.get( theSection, option ).split( "," )
                if len(condPars) == 1:
                    if len(condPars[0])==0:
                        msg = ("In section [%s]: '%s' is used with too few "
                               "arguments. A connect_string and a tag are "
                               "required!"%(theSection, option))
                        raise AllInOneError(msg)
                    elif self.__shorthandExists(rcdName, condPars[0]):
                        shorthand = condPars[0]
                        condPars = [
                            self.condShorts[rcdName][shorthand]["connectString"],
                            self.condShorts[rcdName][shorthand]["tagName"],
                            self.condShorts[rcdName][shorthand]["labelName"]]
                    elif rcdName == "TrackerAlignmentErrorExtendedRcd" and condPars[0] == "zeroAPE":
                        raise AllInOneError("Please specify either zeroAPE_phase0 or zeroAPE_phase1")
                        #can probably make zeroAPE an alias of zeroAPE_phase1 at some point,
                        #but not sure if now is the time
                    else:
                        msg = ("In section [%s]: '%s' is used with '%s', "
                               "which is an unknown shorthand for '%s'. Either "
                               "provide at least a connect_string and a tag or "
                               "use a known shorthand.\n"
                               %(theSection, option, condPars[0], rcdName))
                        if rcdName in self.condShorts:
                            msg += "Known shorthands for '%s':\n"%(rcdName)
                            theShorts = self.condShorts[rcdName]
                            knownShorts = [("\t"+key+": "
                                            +theShorts[key]["connectString"]+","
                                            +theShorts[key]["tagName"]+","
                                            +theShorts[key]["labelName"]) \
                                               for key in theShorts]
                            msg+="\n".join(knownShorts)
                        else:
                            msg += ("There are no known shorthands for '%s'."
                                    %(rcdName))
                        raise AllInOneError(msg)
                if len( condPars ) == 2:
                    condPars.append( "" )
                if len(condPars) > 3:
                    msg = ("In section [%s]: '%s' is used with too many "
                           "arguments. A maximum of 3 arguments is allowed."
                           %(theSection, option))
                    raise AllInOneError(msg)
                conditions.append({"rcdName": rcdName.strip(),
                                   "connectString": condPars[0].strip(),
                                   "tagName": condPars[1].strip(),
                                   "labelName": condPars[2].strip()})

        rcdnames = collections.Counter(condition["rcdName"] for condition in conditions)
        if rcdnames and max(rcdnames.values()) >= 2:
            raise AllInOneError("Some conditions are specified multiple times (possibly through mp or hp options)!\n"
                                + ", ".join(rcdname for rcdname, count in six.iteritems(rcdnames) if count >= 2))

        for condition in conditions:
            self.__testDbExist(condition["connectString"], condition["tagName"])

        return conditions
예제 #3
0
 def __testDbExist(self, dbpath, tagname):
     if dbpath.startswith("sqlite_file:"):
         if not os.path.exists( dbpath.split("sqlite_file:")[1] ):
             raise AllInOneError("could not find file: '%s'"%dbpath.split("sqlite_file:")[1])
         elif "\n"+tagname not in conddb("--db", dbpath.split("sqlite_file:")[1], "listTags"):
             raise AllInOneError("{} does not exist in {}".format(tagname, dbpath))