def main():
projects = load_projects_json()
total_projects = len(projects)
count = 0
bugless_count = 0
print 'Found %d Projects' % (total_projects, )
for p in projects:
piter = MongoProjectIterator(p.group_id(),
p.artifact_id(),
fields=[
'JarMetadata.group_id',
'JarMetadata.artifact_id',
'JarMetadata.version',
'JarMetadata.version_order',
'BugCollection.BugInstance.category',
'BugCollection.BugInstance.type'
])
doc_list = piter.documents_list()
proj_array_count = ArrayCount()
bug_list = []
count += 1
for d in doc_list:
bug_instances = d.get('BugCollection', {}).get('BugInstance', [])
if len(bug_instances) == 0:
bugless_count += 1
break
print '[%d:%d:%d] %s||%s: %d versions' % (
count, total_projects, bugless_count, p.group_id(),
p.artifact_id(), len(doc_list))
print "bugless: %d, total: %d" % (bugless_count, total)
def main():
statistics = ArrayCount()
for p in load_projects_json():
statistics.incr(p.version_count())
strio = StringIO.StringIO()
for (k, v) in statistics.get_series().iteritems():
strio.write(str(k) + "," + str(v) + "\n")
save_to_file('version_count.dat', strio.getvalue())
def main():
base_url = '/Users/bkarak/devel/repositories/maven/maven/'
col_obj = get_mongo_connection()[MONGO_COL]
projects = load_projects_json()
total_jars = 0
missing = 0
really_missing = 0
for proj in projects:
group_id = proj.group_id().strip()
artifact_id = proj.artifact_id().strip()
maven_base_url = '%s%s/%s/' % (base_url, group_id.replace('.', '/'), artifact_id)
maven_metadata_name = '%smaven-metadata.xml' % (maven_base_url,)
if not os.path.exists(maven_metadata_name):
continue
json_xml = xmldict.parse(open(maven_metadata_name, 'r').read())
versions = json_xml.get('metadata', {}).get('versioning', {}).get('versions', {}).get('version')
version_list = []
if isinstance(versions, list):
version_list.extend(versions)
else:
version_list.append(versions)
for v in version_list:
if v is not None:
v = v.strip()
docs = get_version(col_obj, group_id, artifact_id, v)
total_jars += 1
if len(docs) == 0:
missing += 1
sys.stderr.write('[%d]: Missing %s||%s||%s\n' % (total_jars, group_id, artifact_id, v))
local_jar_path = '%s%s/%s-%s.jar' % (maven_base_url, v, artifact_id, v)
if not os.path.exists(local_jar_path):
sys.stderr.write('[%d]: Invalid Jar: %s||%s||%s\n' % (total_jars, group_id, artifact_id, v))
really_missing += 1
else:
if has_classes(local_jar_path):
sys.stderr.write('ADDED: Total: %d, Missing: %d (%d)\n' % (total_jars, missing - really_missing, missing))
print "findbugs -textui -xml -output `basename %s`-findbugs.xml %s" % (local_jar_path, local_jar_path)
else:
really_missing += 1
sys.stderr.write('HAS_NO_CLASSES: %s\n' % (local_jar_path,))
sys.stderr.write('Total: %d, Missing: %d (%d)\n' % (total_jars, missing - really_missing, missing))
def main():
project_list = load_projects_json()
project_count = len(project_list)
version_list = [x.version_count() for x in project_list]
version_count = sum(version_list)
version_list = sorted(version_list)
print "Projects: %d" % (project_count,)
print "Versions (total): %d" % (version_count,)
print "Max. Version Count: %d" % (statistics.stat_max(version_list),)
print "Min. Version Count: %d" % (statistics.stat_min(version_list),)
print "Mean: %.2f" % (statistics.mean(version_list))
print "Median: %d" % (version_list[statistics.median(version_list)])
print "Range: %d" % (statistics.stat_range(version_list))
print "1st Qrt: %d" % (version_list[statistics.first_quartile(version_list)])
print "3rd Qrt: %d" % (version_list[statistics.third_quartile(version_list)])
def main():
projects = load_projects_json()
total_projects = len(projects)
count = 0
bugless_count = 0
print 'Found %d Projects' % (total_projects,)
for p in projects:
piter = MongoProjectIterator(p.group_id(), p.artifact_id(), fields=['JarMetadata.group_id', 'JarMetadata.artifact_id', 'JarMetadata.version', 'JarMetadata.version_order', 'BugCollection.BugInstance.category', 'BugCollection.BugInstance.type'])
doc_list = piter.documents_list()
proj_array_count = ArrayCount()
bug_list = []
count += 1
for d in doc_list:
bug_instances = d.get('BugCollection', {}).get('BugInstance', [])
if len(bug_instances) == 0:
bugless_count += 1
break
print '[%d:%d:%d] %s||%s: %d versions' % (count, total_projects, bugless_count, p.group_id(), p.artifact_id(), len(doc_list))
print "bugless: %d, total: %d" % (bugless_count, total)
def main():
projects = load_projects_json()
valid_projects = []
total = len(projects)
valid = 0
counter = 0
for p in projects:
counter += 1
key = '%s||%s' % (p.group_id(), p.artifact_id())
piter = MongoProjectIterator(p.group_id(), p.artifact_id(), fields=['JarMetadata.version_order'])\
piter.evolution_list()
print '[%d:%d:%d] Checking ... %s' % (counter, valid, total, key),
if piter.valid():
valid_projects.append(key)
print ' ... Valid (%d versions)' % (len(piter.evolution_list()))
valid += 1
else:
print ' ... Invalid (%d versions)' % (len(piter.evolution_list()))
print 'Total: %d, Valid: %d' % (total, valid)
save_to_file('valid_projects.json', json.dumps(valid_projects))
def main():
projects = load_projects_json()
results = {}
security_bugs = ['HRS_REQUEST_PARAMETER_TO_COOKIE',
'HRS_REQUEST_PARAMETER_TO_HTTP_HEADER',
'PT_ABSOLUTE_PATH_TRAVERSAL',
'SQL_NONCONSTANT_STRING_PASSED_TO_EXECUTE',
'SQL_PREPARED_STATEMENT_GENERATED_FROM_NONCONSTANT_STRING',
'XSS_REQUEST_PARAMETER_TO_JSP_WRITER',
'XSS_REQUEST_PARAMETER_TO_SEND_ERROR',
'XSS_REQUEST_PARAMETER_TO_SERVLET_WRITER']
total_projects = len(projects)
count = 0
print 'Found %d Projects' % (total_projects,)
for p in projects:
piter = MongoProjectIterator(p.group_id(), p.artifact_id(), fields=['JarMetadata.group_id', 'JarMetadata.artifact_id', 'JarMetadata.version', 'JarMetadata.version_order', 'BugCollection.BugInstance.category', 'BugCollection.BugInstance.type', 'BugCollection.BugInstance.Class.classname','BugCollection.BugInstance.Method.name', 'BugCollection.BugInstance.Field.name'])
doc_list = piter.documents_list()
proj_array_count = ArrayCount()
bug_list = []
count += 1
print '[%d:%d] %s||%s: %d versions' % (count, total_projects, p.group_id(), p.artifact_id(), len(doc_list))
for d in doc_list:
for bi in d.get('BugCollection', {}).get('BugInstance', []):
if not isinstance(bi, dict):
#print 'Invalid BugInstance (%s)' % (bi,)
continue
bug_c = bi.get('category', '')
if bug_c == 'SECURITY':
bug_type = bi.get('type', None)
if bug_type is None:
print 'Invalid Type!'
continue
if bug_type in security_bugs:
bug_category = 'SECURITY_HIGH'
else:
bug_category = 'SECURITY_LOW'
else:
bug_category = bug_c
# create signature
signatures_ids = []
classnames = bi['Class']
if isinstance(classnames, list):
for c in classnames:
signatures_ids.append(c.get('classname', 'NotSet'))
elif isinstance(classnames, dict):
signatures_ids.append(classnames.get('classname', 'NotSet'))
# methods
methodnames = bi.get('Method', {})
if isinstance(methodnames, list):
for m in methodnames:
signatures_ids.append(m.get('name', 'NotSet'))
elif isinstance(methodnames, dict):
signatures_ids.append(methodnames.get('name', 'NotSet'))
# fields
fieldnames = bi.get('Field', {})
if isinstance(fieldnames, list):
for f in fieldnames:
signatures_ids.append(f.get('name', 'NotSet'))
elif isinstance(fieldnames, dict):
signatures_ids.append(fieldnames.get('name', 'NotSet'))
type = bi['type']
signature = '%s||%s||%s' % (bug_category, type, '||'.join(signatures_ids))
# method
if signature not in bug_list:
bug_list.append(signature)
proj_array_count.incr(bug_category)
proj_array_count.incr('TOTAL_' + bug_category)
print proj_array_count.get_series()
results['%s||%s' % (p.group_id(), p.artifact_id())] = proj_array_count.get_series()
save_to_file('bug_correlation_counters_full.json', json.dumps(results))
def main():
projects = load_projects_json()
results = {}
security_bugs = ['HRS_REQUEST_PARAMETER_TO_COOKIE',
'HRS_REQUEST_PARAMETER_TO_HTTP_HEADER',
'SQL_NONCONSTANT_STRING_PASSED_TO_EXECUTE',
'SQL_PREPARED_STATEMENT_GENERATED_FROM_NONCONSTANT_STRING',
'XSS_REQUEST_PARAMETER_TO_JSP_WRITER',
'XSS_REQUEST_PARAMETER_TO_SEND_ERROR',
'XSS_REQUEST_PARAMETER_TO_SERVLET_WRITER']
sql_bugs = {'activemq-all', 'activemq', 'activeobjects', 'cas-workflow',
'ebxmlms', 'efaps-kernel', 'fabric3-binding-ws', 'geotk-metadata-sql',
'jackrabbit-standalone', 'james', 'james-server-mailets', 'jcaptcha-all',
'jdatabaseimport', 'jetty-webapp', 'jonas-jms-manager', 'joram', 'kernel',
'makumba', 'MetaModel', 'nunaliit2-adhocQueries', 'openjms',
'org.openl.rules.eclipse.ui.wizard', 'sandesha2-persistence',
'servicemix-components', 'sesame', 'sonar-application', 'sqltool',
'sqltool-j5', 'squirrel-sql', 'torque', 'transactions-jta',
'ujo-orm', 'xmlui'}
xss_bugs = {'activemq-all', 'activemq-web', 'makumba', 'netcdf', 'opendap',
'org.talend.esb.job.console', 'rdfbean-sparql', 'tika-app',
'tuscany-domain-manager', 'tuscany-sca-all', 'webmin', 'WebProxyPortlet',
'whiteboard', 'activemq', 'apacheds', 'avro-tools', 'css-validator',
'dspace-jspui-api', 'dspace-lni-core', 'fabric3-binding-ws', 'force-oauth',
'groovysoap-all-jsr06', 'jackrabbit-standalone', 'jetty-webapp', 'jftp',
'makumba', 'MessAdmin-Core', 'myfaces', 'myfaces-all', 'ocpsoft-pretty-faces',
'org.apache.felix.webconsole', 'org.apache.sling.openidauth',
'org.jbundle.util.webapp.redirect', 'org.talend.esb.job.console',
'pustefix-webservices-jaxws', 'sonar-application', 'vt-ldap'}
input_bugs = set()
input_bugs |= sql_bugs
input_bugs |= xss_bugs
total_projects = len(projects)
count = 0
print 'Found %d Projects' % (total_projects,)
for p in projects:
piter = MongoProjectIterator(p.group_id(), p.artifact_id(), fields=['JarMetadata.group_id', 'JarMetadata.artifact_id', 'JarMetadata.version', 'JarMetadata.version_order', 'BugCollection.BugInstance.category', 'BugCollection.BugInstance.type', 'BugCollection.BugInstance.Class.classname','BugCollection.BugInstance.Method.name', 'BugCollection.BugInstance.Field.name'])
doc_list = piter.documents_list()
proj_array_count = ArrayCount()
bug_list = []
count += 1
print '[%d:%d] %s||%s: %d versions' % (count, total_projects, p.group_id(), p.artifact_id(), len(doc_list))
for d in doc_list:
for bi in d.get('BugCollection', {}).get('BugInstance', []):
if not isinstance(bi, dict):
#print 'Invalid BugInstance (%s)' % (bi,)
continue
bug_c = bi.get('category', '')
if bug_c == 'SECURITY':
bug_type = bi.get('type', None)
if bug_type is None:
print 'Invalid Type!'
continue
if bug_type in security_bugs:
if p.artifact_id() in input_bugs:
bug_category = 'INPUT_VALIDATION_BUGS'
else:
continue
else:
bug_category = 'SECURITY_REST'
else:
bug_category = bug_c
# create signature
signatures_ids = []
classnames = bi['Class']
if isinstance(classnames, list):
for c in classnames:
signatures_ids.append(c.get('classname', 'NotSet'))
elif isinstance(classnames, dict):
signatures_ids.append(classnames.get('classname', 'NotSet'))
# methods
methodnames = bi.get('Method', {})
if isinstance(methodnames, list):
for m in methodnames:
signatures_ids.append(m.get('name', 'NotSet'))
elif isinstance(methodnames, dict):
signatures_ids.append(methodnames.get('name', 'NotSet'))
# fields
fieldnames = bi.get('Field', {})
if isinstance(fieldnames, list):
for f in fieldnames:
signatures_ids.append(f.get('name', 'NotSet'))
elif isinstance(fieldnames, dict):
signatures_ids.append(fieldnames.get('name', 'NotSet'))
type = bi['type']
signature = '%s||%s||%s' % (bug_category, type, '||'.join(signatures_ids))
# method
if signature not in bug_list:
bug_list.append(signature)
proj_array_count.incr(bug_category)
proj_array_count.incr('TOTAL_' + bug_category)
print proj_array_count.get_series()
results['%s||%s' % (p.group_id(), p.artifact_id())] = proj_array_count.get_series()
save_to_file('data/bug_correlation_counters_full.json', json.dumps(results))
