def spikes_removal_tool(self, signal_mask=None, navigation_mask=None):
"""Graphical interface to remove spikes from EELS spectra.
Parameters
----------
signal_mask: boolean array
Restricts the operation to the signal locations not marked
as True (masked)
navigation_mask: boolean array
Restricts the operation to the navigation locations not
marked as True (masked)
See also
--------
_spikes_diagnosis,
"""
self._check_signal_dimension_equals_one()
sr = SpikesRemoval(self, navigation_mask=navigation_mask, signal_mask=signal_mask)
sr.configure_traits()
return sr
def spikes_removal_tool(self, signal_mask=None, navigation_mask=None):
"""Graphical interface to remove spikes from EELS spectra.
Parameters
----------
signal_mask: boolean array
Restricts the operation to the signal locations not marked
as True (masked)
navigation_mask: boolean array
Restricts the operation to the navigation locations not
marked as True (masked)
See also
--------
_spikes_diagnosis,
"""
self._check_signal_dimension_equals_one()
sr = SpikesRemoval(self,
navigation_mask=navigation_mask,
signal_mask=signal_mask)
sr.edit_traits()
return sr
def test_spikes_removal(self):
from hyperspy.gui.egerton_quantification import SpikesRemoval
m = mock.Mock()
s = self.s
s.events.data_changed.connect(m.data_changed)
sr = SpikesRemoval(s)
sr.threshold = 0.5
sr.find()
sr.apply()
nt.assert_equal(s.data[0, 50], 0)
nt.assert_true(m.data_changed.called)
def spikes_removal_tool(self,signal_mask=None, spatial_mask=None):
sr = SpikesRemoval(self,spatial_mask=spatial_mask,
signal_mask=signal_mask)
sr.edit_traits()
return sr
