def show_thumbnail_montage(self, wellkey, pos):
images = db.execute(
'SELECT %s FROM %s WHERE %s ORDER BY %s' %
(','.join(p.image_thumbnail_cols), p.image_table,
dbconnect.GetWhereClauseForWells([wellkey]), p.image_id))
if images == []:
return
imsets = []
for channels in images:
try:
pngs = [Image.open(StringIO(im), 'r') for im in channels]
except IOError as e:
pngs = [
Image.open(StringIO(b64decode(im)), 'r') for im in channels
]
imsets += [[
np.fromstring(png.tobytes(), dtype='uint8').reshape(
png.size[1], png.size[0]).astype('float32') / 255
for png in pngs
]]
n_channels = len(imsets[0])
composite = []
for i in xrange(n_channels):
# composite each channel separately
composite += [
imagetools.tile_images([imset[i] for imset in imsets])
]
bmp = imagetools.MergeToBitmap(composite, p.image_channel_colors)
popup = BitmapPopup(self, bmp, pos=pos)
popup.Show()
def show_thumbnail_montage(self, wellkey, pos):
images = db.execute('SELECT %s FROM %s WHERE %s ORDER BY %s'%
(','.join(p.image_thumbnail_cols), p.image_table,
dbconnect.GetWhereClauseForWells([wellkey]),
p.image_id))
if images == []:
return
imsets = []
for channels in images:
try:
pngs = [Image.open(StringIO(im), 'r') for im in channels]
except IOError as e:
pngs = [Image.open(StringIO(b64decode(im)), 'r') for im in channels]
imsets += [[np.fromstring(png.tobytes(), dtype='uint8').reshape(png.size[1], png.size[0]).astype('float32') / 255
for png in pngs]]
n_channels = len(imsets[0])
composite = []
for i in xrange(n_channels):
# composite each channel separately
composite += [imagetools.tile_images([imset[i] for imset in imsets])]
bmp = imagetools.MergeToBitmap(composite, p.image_channel_colors)
popup = BitmapPopup(self, bmp, pos=pos)
popup.Show()
p.image_id = 'ImageNumber'
p.channels_per_image = [1, 1, 1]
images = [
np.ones((200, 200)),
np.ones((200, 200)) / 2.,
np.ones((200, 200)) / 4.,
np.ones((200, 200)) / 8.,
np.ones((200, 200)),
np.ones((200, 200)) / 2.,
np.ones((200, 200)) / 4.,
np.ones((200, 200)) / 8.,
]
pixels = []
for channel in p.image_channel_colors:
pixels += [imagetools.tile_images(images)]
f = ImageViewer(pixels)
f.Show()
## if not p.show_load_dialog():
## logging.error('ImageViewer requires a properties file. Exiting.')
## wx.GetApp().Exit()
## raise Exception('ImageViewer requires a properties file. Exiting.')
##
## db = DBConnect.getInstance()
## dm = DataModel.getInstance()
## ir = ImageReader()
##
## obKey = dm.GetRandomObject()
## imagetools.ShowImage(obKey[:-1], p.image_channel_colors, None)
p.image_names = ['a', 'b', 'c']
p.image_id = 'ImageNumber'
p.channels_per_image = [1,1,1]
images = [np.ones((200,200)),
np.ones((200,200)) / 2. ,
np.ones((200,200)) / 4. ,
np.ones((200,200)) / 8. ,
np.ones((200,200)),
np.ones((200,200)) / 2. ,
np.ones((200,200)) / 4. ,
np.ones((200,200)) / 8. ,
]
pixels = []
for channel in p.image_channel_colors:
pixels += [imagetools.tile_images(images)]
f = ImageViewer(pixels)
f.Show()
## if not p.show_load_dialog():
## logging.error('ImageViewer requires a properties file. Exiting.')
## wx.GetApp().Exit()
## raise Exception('ImageViewer requires a properties file. Exiting.')
##
## db = DBConnect.getInstance()
## dm = DataModel.getInstance()
## ir = ImageReader()
##
## obKey = dm.GetRandomObject()
return
imsets = []
for channels in images:
try:
pngs = [Image.open(StringIO(im), 'r') for im in channels]
except IOError, e:
pngs = [Image.open(StringIO(b64decode(im)), 'r') for im in channels]
imsets += [[np.fromstring(png.tostring(), dtype='uint8').reshape(png.size[1], png.size[0]).astype('float32') / 255
for png in pngs]]
n_channels = len(imsets[0])
composite = []
for i in xrange(n_channels):
# composite each channel separately
composite += [imagetools.tile_images([imset[i] for imset in imsets])]
bmp = imagetools.MergeToBitmap(composite, p.image_channel_colors)
popup = BitmapPopup(self, bmp, pos=pos)
popup.Show()
if __name__ == "__main__":
app = wx.PySimpleApp()
data = np.arange(5600.)
a = np.zeros((40,140))
i = 0
for r, row in enumerate(a):
if r % 2 == 0:
a[r] = data[i:i+140]
pngs = [
Image.open(StringIO(b64decode(im)), 'r') for im in channels
]
imsets += [[
np.fromstring(png.tobytes(), dtype='uint8').reshape(
png.size[1], png.size[0]).astype('float32') / 255
for png in pngs
]]
n_channels = len(imsets[0])
composite = []
for i in xrange(n_channels):
# composite each channel separately
composite += [
imagetools.tile_images([imset[i] for imset in imsets])
]
bmp = imagetools.MergeToBitmap(composite, p.image_channel_colors)
popup = BitmapPopup(self, bmp, pos=pos)
popup.Show()
if __name__ == "__main__":
app = wx.PySimpleApp()
data = np.arange(5600.)
a = np.zeros((40, 140))
i = 0
for r, row in enumerate(a):
if r % 2 == 0:
a[r] = data[i:i + 140]
