def main(argc, argv):
if argc > 2:
db_config = Configuration(argv[2])
else:
db_config = Configuration('config/db_config.json')
logger = Logger(db_config.get_value('log'))
if argc < 2:
logger.log(Logger.ERROR,
'Configuration file for index creation required')
return
vec_config = Configuration(argv[1])
user = db_config.get_value('username')
password = db_config.get_value('password')
host = db_config.get_value('host')
db_name = db_config.get_value('db_name')
# init db connection
try:
con = psycopg2.connect("dbname='" + db_name + "' user='******' host='" + host + "' password='******'")
except:
logger.log(Logger.ERROR, 'Can not connect to database')
return
cur = con.cursor()
init_tables(con, cur, vec_config.get_value('table_name'), logger)
insert_vectors(vec_config.get_value('vec_file_path'), con, cur,
vec_config.get_value('table_name'),
db_config.get_value('batch_size'),
vec_config.get_value('normalized'), logger)
# commit changes
con.commit()
# create index
utils.create_index(vec_config.get_value('table_name'),
vec_config.get_value('index_name'), 'word', con, cur,
logger)
# close connection
con.close()
def add_to_database(db_config, index_config, type, index_file, logger):
# create db connection
con = None
try:
con = psycopg2.connect("dbname='" + db_config.get_value('db_name') +
"' user='******'username') +
"' host='" + db_config.get_value('host') +
"' password='******'password') + "'")
except:
logger.log(Logger.ERROR, 'Can not connect to database')
return
cur = con.cursor()
if type == 'pq':
data = im.load_index(index_file)
utils.init_tables(con, cur,
pq_index.get_table_information(index_config), logger)
pq_index.add_to_database(data['words'], data['codebook'],
data['index'], data['counts'], con,
cur, index_config,
db_config.get_value('batch_size'), logger)
utils.create_index(index_config.get_value("pq_table_name"),
index_config.get_value("pq_index_name"), 'word',
con, cur, logger)
elif type == 'ivfadc':
data = im.load_index(index_file)
utils.init_tables(con, cur, ivfadc.get_table_information(index_config),
logger)
ivfadc.add_to_database(data['words'], data['cq'], data['codebook'],
data['index'], data['coarse_counts'],
data['fine_counts'], con, cur, index_config,
db_config.get_value('batch_size'), logger)
utils.create_index(index_config.get_value('fine_table_name'),
index_config.get_value('fine_word_index_name'),
'word', con, cur, logger)
utils.create_index(index_config.get_value('fine_table_name'),
index_config.get_value('fine_coarse_index_name'),
'coarse_id', con, cur, logger)
elif type == 'ivfadc_pipeline':
# TODO test
data = im.load_pipeline_ivfadc_index(
index_file, index_file + '.tmp',
index_config.get_value('coarse_quantizer_file'),
index_config.get_value('residual_codebook_file'))
utils.init_tables(con, cur, ivfadc.get_table_information(index_config),
logger)
ivfadc.add_to_database(data['words'], data['cq'], data['codebook'],
data['index'], data['coarse_counts'],
data['fine_counts'], con, cur, index_config,
db_config.get_value('batch_size'), logger)
utils.create_index(index_config.get_value('fine_table_name'),
index_config.get_value('fine_word_index_name'),
'word', con, cur, logger)
utils.create_index(index_config.get_value('coarse_table_name'),
index_config.get_value('fine_coarse_index_name'),
'coarse_id', con, cur, logger)
elif type == 'pq_pipeline':
# TODO test
data = im.load_pipeline_pq_index(
index_file, index_file + '.tmp',
index_config.get_value('codebook_file'))
utils.init_tables(con, cur, pq.get_table_information(index_config),
logger)
pq.add_to_database(data['words'], data['codebook'], data['index'],
data['counts'], con, cur, index_config,
db_config.get_value('batch_size'), logger)
utils.create_index(index_config.get_value("pq_table_name"),
index_config.get_value("pq_index_name"), 'word',
con, cur, logger)
else:
logger.log(logger.WARNING, 'Index type ' + str(type) + ' unknown')
return
def main(argc, argv):
db_config = Configuration('config/db_config.json')
logger = Logger(db_config.get_value('log'))
if argc < 2:
logger.log(Logger.ERROR,
'Configuration file for index creation required')
return
index_config = Configuration(argv[1])
batch_size = db_config.get_value("batch_size")
train_size_coarse = index_config.get_value('train_size_coarse')
train_size_fine = index_config.get_value('train_size_fine')
centr_num_coarse = index_config.get_value('k_coarse')
m = index_config.get_value('m')
k = index_config.get_value('k')
# get vectors
words, vectors, vectors_size = \
utils.get_vectors(index_config.get_value('vec_file_path'), logger)
logger.log(logger.INFO, 'vectors_size :' + str(vectors_size))
# determine coarse quantizer
cq = None
cq_filename = index_config.get_value('coarse_quantizer_file') if \
index_config.has_key('coarse_quantizer_file') else None
cq_output_name = cq_filename if cq_filename != None else 'coarse_quantizer.pcl'
if COARSE_TYPE == 'MULTI_INDEX':
cq = qcreator.construct_quantizer(
qcreator.create_quantizer,
(vectors[:train_size_fine], 2, centr_num_coarse, logger),
logger,
input_name=cq_filename,
output_name=cq_output_name)
else:
cq = qcreator.construct_quantizer(
qcreator.create_coarse_quantizer,
(vectors[:train_size_coarse], centr_num_coarse),
logger,
input_name=cq_filename,
output_name=cq_output_name)
# determine codebook
codebook = None
codebook_filename = index_config.get_value('codebook_file') if \
index_config.has_key('codebook_file') else None
codebook_output_name = codebook_filename if codebook_filename != None else 'codebook.pcl'
codebook = qcreator.construct_quantizer(
qcreator.create_quantizer, (vectors[:train_size_fine], m, k, logger),
logger,
input_name=codebook_filename,
output_name=codebook_output_name)
# create db connection
con, cur = db_export.create_connection(db_config, logger)
# prepare database
utils.init_tables(con, cur, get_table_information(index_config), logger)
utils.disable_triggers(index_config.get_value('fine_table_name'), con, cur)
# create index with quantizers
logger.log(logger.INFO, 'Start index creation (single cycle)')
start = time.time()
index, coarse_counts, fine_counts = \
create_index_data(vectors[:vectors_size], cq, codebook, logger)
end = time.time()
logger.log(logger.INFO,
'Finish index creation after ' + str(end - start) + ' seconds')
# add to database
add_to_database(words, cq, codebook, index, coarse_counts, fine_counts,
con, cur, index_config, batch_size, logger)
logger.log(logger.INFO, 'Create database index structures')
utils.create_index(index_config.get_value('fine_table_name'),
index_config.get_value('fine_word_index_name'), 'id',
con, cur, logger)
utils.create_index(index_config.get_value('fine_table_name'),
index_config.get_value('fine_coarse_index_name'),
'coarse_id', con, cur, logger)
# create statistics
if (index_config.has_key('statistic_table')
and index_config.has_key('statistic_column')
and CREATE_STATS_TABLE):
utils.create_statistics_table(
index_config.get_value('statistic_table'),
index_config.get_value('statistic_column'),
index_config.get_value('coarse_table_name'), con, cur, logger)
utils.enable_triggers(index_config.get_value('fine_table_name'), con, cur)
def main(argc, argv):
db_config = Configuration('config/db_config.json')
logger = Logger(db_config.get_value('log'))
if argc < 2:
logger.log(Logger.ERROR, 'Configuration file for index creation required')
return
index_config = Configuration(argv[1])
batch_size = db_config.get_value("batch_size")
train_size_coarse = index_config.get_value('train_size_coarse')
train_size_fine = index_config.get_value('train_size_fine')
centr_num_coarse = index_config.get_value('k_coarse')
m = index_config.get_value('m')
k = index_config.get_value('k')
# get vectors
words, vectors, vectors_size = utils.get_vectors(index_config.get_value('vec_file_path'), logger)
logger.log(logger.INFO, 'vectors_size :' + str(vectors_size))
# determine coarse quantizer
cq = None
if index_config.has_key('coarse_quantizer_file'):
cq_filename = index_config.get_value('coarse_quantizer_file')
if cq_filename:
logger.log(Logger.INFO, 'Use coarse quantizer from ' + cq_filename)
cq = qcreator.load_quantizer(cq_filename)
if type(cq) == type(None):
logger.log(Logger.INFO, 'Create new coarse quantizer')
# create coarse quantizer
cq = qcreator.create_coarse_quantizer(vectors[:train_size_coarse], centr_num_coarse)
# store coarse quantizer
qcreator.store_quantizer(cq, 'coarse_quantizer.pcl')
# determine codebook
codebook = None
if index_config.has_key('residual_codebook_file'):
codebook_filename = index_config.get_value('residual_codebook_file')
if codebook_filename:
logger.log(Logger.INFO, 'Use residual codebook from ' + codebook_filename)
codebook = qcreator.load_quantizer(codebook_filename)
if type(codebook) == type(None):
logger.log(Logger.INFO, 'Create new residual codebook')
# calculate codebook based on residuals
codebook = create_fine_quantizer(cq, vectors[:train_size_fine], m, k, logger)
# store codebook
qcreator.store_quantizer(codebook, 'residual_codebook.pcl')
con = None
cur = None
if (index_config.get_value('add_to_database')):
# create db connection
try:
con = psycopg2.connect("dbname='" + db_config.get_value('db_name') + "' user='******'username') + "' host='" + db_config.get_value('host') + "' password='******'password') + "'")
except:
logger.log(logger.ERROR, 'Can not connect to database')
return
cur = con.cursor()
utils.init_tables(con, cur, get_table_information(index_config), logger)
utils.disable_triggers(index_config.get_value('fine_table_name'),con, cur)
# create index with quantizers
use_pipeline = False
if index_config.has_key('pipeline'):
use_pipeline = index_config.get_value('pipeline')
# single cycle
if not use_pipeline:
logger.log(logger.INFO, 'Start index creation (single cycle)')
start = time.time()
index, coarse_counts, fine_counts = create_index_with_faiss(vectors[:vectors_size], cq, codebook, logger)
end = time.time()
logger.log(logger.INFO, 'Finish index creation after ' + str(end - start) + ' seconds')
# add to file
if (index_config.get_value('export_filename')):
index_data = dict({
'words': words,
'cq': cq,
'codebook': codebook,
'index': index,
'coarse_counts': coarse_counts,
'fine_counts': fine_counts
})
im.save_index(index_data, index_config.get_value('export_filename'))
if (index_config.get_value('add_to_database')):
add_to_database(words, cq, codebook, index, coarse_counts, fine_counts, con, cur, index_config, batch_size, logger)
logger.log(logger.INFO, 'Create database index structures')
utils.create_index(index_config.get_value('fine_table_name'), index_config.get_value('fine_word_index_name'), 'word', con, cur, logger)
utils.create_index(index_config.get_value('fine_table_name'), index_config.get_value('fine_coarse_index_name'), 'coarse_id', con, cur, logger)
utils.enable_triggers(index_config.get_value('fine_table_name'), con, cur)
# pipeline approach
if use_pipeline:
logger.log(logger.INFO, 'Start index creation (pipeline)')
start = time.time()
feeder = VectorFeeder(vectors[:vectors_size], words)
m = len(codebook)
len_centr = int(len(vectors[0]) / m)
calculation = IVFADCIndexCreator(cq, codebook, m, len_centr, logger)
fine_counts = dict()
coarse_counts = dict()
output_file = None
if (index_config.get_value('export_pipeline_data')):
output_file = open(index_config.get_value('export_pipeline_data'), 'wb')
while (feeder.has_next()):
# calculate
batch, word_batch = feeder.get_next_batch(batch_size)
entries, coarse_counts, fine_counts = calculation.index_batch(batch)
# write to database or add to file
if (index_config.get_value('add_to_database')):
# add to database
add_batch_to_database(word_batch, entries, con, cur, index_config, batch_size, logger)
logger.log(logger.INFO, 'Added ' + str(feeder.get_cursor() - batch_size + len(batch)) + ' vectors to the database')
if (index_config.get_value('export_pipeline_data')):
# write to file
index_batch = dict({
'words': word_batch,
'index': entries,
})
count_data = dict({
'coarse_counts': coarse_counts,
'fine_counts': fine_counts
})
pickle.dump(index_batch, output_file)
f = open(index_config.get_value('export_pipeline_data')+'.tmp', 'wb')
pickle.dump(count_data, f)
f.close()
logger.log(logger.INFO, 'Processed ' + str(feeder.get_cursor() - batch_size + len(batch)) + ' vectors')
if output_file:
output_file.close()
if (index_config.get_value('add_to_database')):
# add codebook and cq to database
add_codebook_to_database(codebook, fine_counts, con, cur, index_config)
logger.log(Logger.INFO, 'Added residual codebook entries into database')
add_cq_to_database(cq, coarse_counts, con, cur, index_config)
logger.log(Logger.INFO, 'Added coarse quantizer entries into database')
logger.log(logger.INFO, 'Create database index structures')
utils.create_index(index_config.get_value('fine_table_name'), index_config.get_value('fine_word_index_name'), 'word', con, cur, logger)
utils.create_index(index_config.get_value('fine_table_name'), index_config.get_value('fine_coarse_index_name'), 'coarse_id', con, cur, logger)
utils.enable_triggers(index_config.get_value('fine_table_name'), con, cur)
end = time.time()