def load_lincs_csv(url):
"""Helper function to turn csv rows into dicts."""
resp = requests.get(url, params={'output_type': '.csv'}, timeout=120)
resp.raise_for_status()
if sys.version_info[0] < 3:
csv_io = BytesIO(resp.content)
else:
csv_io = StringIO(resp.text)
data_rows = list(read_unicode_csv_fileobj(csv_io, delimiter=','))
headers = data_rows[0]
return [{header: val for header, val in zip(headers, line_elements)}
for line_elements in data_rows[1:]]
def load_lincs_csv(url):
"""Helper function to turn csv rows into dicts."""
resp = requests.get(url, params={'output_type': '.csv'}, timeout=120)
resp.raise_for_status()
if sys.version_info[0] < 3:
csv_io = BytesIO(resp.content)
else:
csv_io = StringIO(resp.text)
data_rows = list(read_unicode_csv_fileobj(csv_io, delimiter=','))
headers = data_rows[0]
return [{header: val for header, val in zip(headers, line_elements)}
for line_elements in data_rows[1:]]
def _handle_response(res, delimiter):
"""Get an iterator over the CSV data from the response."""
if res.status_code == 200:
# Python 2 -- csv.reader will need bytes
if sys.version_info[0] < 3:
csv_io = BytesIO(res.content)
# Python 3 -- csv.reader needs str
else:
csv_io = StringIO(res.text)
data_iter = read_unicode_csv_fileobj(csv_io, delimiter=delimiter,
skiprows=1)
else:
raise Exception('Could not download Signor data.')
return data_iter
def _handle_response(res, delimiter):
"""Get an iterator over the CSV data from the response."""
if res.status_code == 200:
# Python 2 -- csv.reader will need bytes
if sys.version_info[0] < 3:
csv_io = BytesIO(res.content)
# Python 3 -- csv.reader needs str
else:
csv_io = StringIO(res.text)
data_iter = read_unicode_csv_fileobj(csv_io, delimiter=delimiter,
skiprows=1)
else:
raise Exception('Could not download Signor data.')
return data_iter