def generate_data(dataset, input_conf):
gen = OrderedDict()
for tag, conf in input_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
gen[tag] = generator(config=conf)
return gen
def updateWatches():
inputsList = inputs.get()
namesToWatch = [a['name'] for a in config['applications'] if a['role'] == 'master']
namesToDuck = [a['name'] for a in config['applications'] if a['role'] == 'slave']
inputsToWatch = [i for i in inputsList if i.name in namesToWatch]
inputsToDuck = [i for i in inputsList if i.name in namesToDuck]
inputToDuck = inputsToDuck[0]
inputsToWatchNew = [i for i in inputsToWatch if i.index not in watchingIndices]
for inputToWatch in inputsToWatchNew:
print(f"Started watching {inputToWatch}")
t = threading.Thread(target=reader.monitor, args=[inputToWatch, inputToDuck.index, supervisorInstance]) # added inputToDuck to duck first and only slave.
t.start()
watchingIndices.append(inputToWatch.index)
def get_all(argumentos):
algorit, number = get_from_args(argumentos)
inp = inputs.get(algorit, number)
img = imgs.get(algorit, number)
show = shows.get(algorit, number) # number é inutilizado aqui, mas serve
return inp, img, show
def predict(config):
print(json.dumps(config, indent=2), end='\n')
input_conf = config['inputs']
share_input_conf = input_conf['share']
# collect embedding
if 'embed_path' in share_input_conf:
embed_dict = read_embedding(filename=share_input_conf['embed_path'])
_PAD_ = share_input_conf['vocab_size'] - 1
embed_dict[_PAD_] = np.zeros((share_input_conf['embed_size'], ),
dtype=np.float32)
embed = np.float32(
np.random.uniform(-0.02, 0.02, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = convert_embed_2_numpy(embed_dict,
embed=embed)
else:
embed = np.float32(
np.random.uniform(-0.2, 0.2, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = embed
print('[Embedding] Embedding Load Done.', end='\n')
# list all input tags and construct tags config
input_predict_conf = OrderedDict()
for tag in input_conf.keys():
if 'phase' not in input_conf[tag]:
continue
if input_conf[tag]['phase'] == 'PREDICT':
input_predict_conf[tag] = {}
input_predict_conf[tag].update(share_input_conf)
input_predict_conf[tag].update(input_conf[tag])
print('[Input] Process Input Tags. %s in PREDICT.' %
(input_predict_conf.keys()),
end='\n')
# collect dataset identification
output_conf = config['outputs']
######## Load Model ########
global_conf = config["global"]
weights_file = str(global_conf['weights_file']) + '.' + str(
global_conf['test_weights_iters'])
model = load_model(config)
model.load_weights(weights_file)
sock = socket.socket(
socket.AF_INET, # Internet
socket.SOCK_STREAM) # UDP
sock.bind((TCP_IP, TCP_PORT))
print("Program is now ready for predictions")
while True:
sock.listen(1)
conn, addr = sock.accept()
numberOfMessages = conn.recv(64)
numberOfMessages = int(numberOfMessages)
conn.send("\n".encode(ENCODING))
list_list_data = []
for i in range(0, numberOfMessages):
data = conn.recv(50000)
data_string = str(data.decode(ENCODING))
list_data = data_string.split("\n")
for d in list_data:
d_stripped = d.split(" ")
if (len(d_stripped) > 2):
list_list_data.append(
(d_stripped[0], d_stripped[1], d_stripped[2]))
conn.send("\n".encode(ENCODING))
qData = conn.recv(1000)
qData_string = str(qData.decode(ENCODING))
list_qData = qData_string.split("\n")
list_list_qData = {}
dataset = {}
for d in list_qData:
line = d.strip().split()
tid = line[0]
list_list_qData[tid] = list(map(int, line[2:]))
dataset['querydata'] = list_list_qData
conn.send("\n".encode(ENCODING))
sizeData = conn.recv(50)
sizeData_int = int(sizeData.decode(ENCODING))
list_dData = []
for i in range(0, sizeData_int):
conn.send("\n".encode(ENCODING))
dData = conn.recv(50000)
dData_string = str(dData.decode(ENCODING))
#print(dData_string)
list_dData.append(dData_string)
list_list_dData = {}
for d in list_dData:
line = d.strip().split()
tid = line[0]
list_list_dData[tid] = list(map(int, line[2:]))
dataset['documentdata'] = list_list_dData
predict_gen = OrderedDict()
for tag, conf in input_predict_conf.items():
conf['data2'] = dataset['documentdata']
conf['data1'] = dataset['querydata']
generator = inputs.get(conf['input_type'])
predict_gen[tag] = generator(
#data1 = dataset[conf['text1_corpus']],
#data2 = dataset[conf['text2_corpus']],
config=conf,
rel_data=list_list_data)
dataset = {}
for tag, generator in predict_gen.items():
genfun = generator.get_batch_generator()
for input_data, y_true in genfun:
y_pred = model.predict(input_data, batch_size=len(y_true))
print("Sending message")
message = " ".join(map(str, y_pred.tolist()))
message = message + '\n'
#print(sys.getsizeof(message))
#print(message)
#sendSock.setsockopt(socket.SOL_SOCKET, socket.SO_SNDBUF, 4112) # Buffer size 8192
conn.send(message.encode(ENCODING))
plt.ylabel('Velocity (m/s)')
plt.xlabel('Time (seconds)')
plt.axis([0, timeList[-1], 0, (velocityList[-1] + 10)])
plt.plot(timeList, velocityList)
#places arrow on graph to show terminal velocity and the time
arrowString = 'Terminal:\n' + str(velocityList[-1]) + ' m/s\n' + str(
timeList[-1]) + ' seconds'
plt.annotate((arrowString),
xy=(timeList[-1], velocityList[-1]),
xytext=(timeList[-1] - 10, velocityList[-1] - 20),
arrowprops=dict(facecolor='black', shrink=0.05))
#displays the graph
plt.show()
if __name__ == "__main__":
#gathers all necessary variables to calculate model
timeInterval, acceleration, initialVelocity, dragCoefficient, mass, area = inputs.get(
)
#passes those variables onto calculate()
timeList, accelerationList, velocityList, distanceList = calculate(
timeInterval, acceleration, initialVelocity, dragCoefficient, mass,
area)
#gets lists and passes them to be rendered
renderTable(timeList, accelerationList, velocityList, distanceList)
dataset[datapath], _ = read_data(datapath)
if 'text2_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text2_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
print('[Dataset] %s Dataset Load Done.' % len(dataset), end='\n')
# initial data generator
train_gen = OrderedDict()
eval_gen = OrderedDict()
for tag, conf in input_train_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
train_gen[tag] = generator(config=conf)
for tag, conf in input_eval_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
eval_gen[tag] = generator(config=conf)
import models
sys.path.append('/home/xingyuchen/jupyter/matchzoo/models/')
from matchpyramid import *
from anmm import *
model_config = config['model']['setting']
model_config.update(config['inputs']['share'])
def train(config):
print(json.dumps(config, indent=2))
# read basic config
global_conf = config["global"]
optimizer = global_conf['optimizer']
weights_file = str(global_conf['weights_file']) + '.%d'
display_interval = int(global_conf['display_interval'])
num_iters = int(global_conf['num_iters'])
save_weights_iters = int(global_conf['save_weights_iters'])
is_save_weights = global_conf['is_save_weights']
# read input config
input_conf = config['inputs']
share_input_conf = input_conf['share']
# prepare the corpus files and reference files for computing BLEU/ROUGE-L metrics
corpus_file = share_input_conf['corpus_file']
test_ref_list = read_refs(share_input_conf['test_ref_file'])
valid_ref_list = read_refs(share_input_conf['valid_ref_file'])
corpus_dict = {}
with open(corpus_file) as fin:
for l in fin:
tok = l.split(' ')
corpus_dict[tok[0]] = ' '.join(tok[2:])
# collect embedding
if 'embed_path' in share_input_conf:
embed_dict = read_embedding(filename=share_input_conf['embed_path'])
_PAD_ = share_input_conf['vocab_size'] - 1
embed_dict[_PAD_] = np.zeros((share_input_conf['embed_size'], ),
dtype=np.float32)
embed = np.float32(
np.random.uniform(-0.2, 0.2, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = convert_embed_2_numpy(embed_dict,
embed=embed)
else:
embed = np.float32(
np.random.uniform(-0.2, 0.2, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = embed
print '[Embedding] Embedding Load Done.'
# list all input tags and construct tags config
input_train_conf = OrderedDict()
input_eval_conf = OrderedDict()
for tag in input_conf.keys():
if 'phase' not in input_conf[tag]:
continue
if input_conf[tag]['phase'] == 'TRAIN':
input_train_conf[tag] = {}
input_train_conf[tag].update(share_input_conf)
input_train_conf[tag].update(input_conf[tag])
elif input_conf[tag]['phase'] == 'EVAL':
input_eval_conf[tag] = {}
input_eval_conf[tag].update(share_input_conf)
input_eval_conf[tag].update(input_conf[tag])
print '[Input] Process Input Tags. %s in TRAIN, %s in EVAL.' % (
input_train_conf.keys(), input_eval_conf.keys())
# collect dataset identification
dataset = {}
for tag in input_conf:
if tag != 'share' and input_conf[tag]['phase'] == 'PREDICT':
continue
if 'text1_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text1_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
if 'text2_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text2_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
print '[Dataset] %s Dataset Load Done.' % len(dataset)
# initial data generator
train_gen = OrderedDict()
eval_gen = OrderedDict()
for tag, conf in input_train_conf.items():
print conf
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
train_gen[tag] = generator(config=conf)
for tag, conf in input_eval_conf.items():
print conf
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
eval_gen[tag] = generator(config=conf)
output_conf = config['outputs']
######### Load Model #########
model = load_model(config)
loss = []
for lobj in config['losses']:
if lobj['object_name'] in mz_specialized_losses:
loss.append(
rank_losses.get(lobj['object_name'])(lobj['object_params']))
else:
loss.append(rank_losses.get(lobj['object_name']))
eval_metrics = OrderedDict()
for mobj in config['metrics']:
mobj = mobj.lower()
if '@' in mobj:
mt_key, mt_val = mobj.split('@', 1)
eval_metrics[mobj] = metrics.get(mt_key)(int(mt_val))
else:
eval_metrics[mobj] = metrics.get(mobj)
model.compile(optimizer=optimizer, loss=loss)
print '[Model] Model Compile Done.'
for i_e in range(num_iters):
for tag, generator in train_gen.items():
genfun = generator.get_batch_generator()
print '[%s]\t[Train:%s]' % (time.strftime(
'%m-%d-%Y %H:%M:%S', time.localtime(time.time())), tag),
history = model.fit_generator(genfun,
steps_per_epoch=display_interval,
epochs=1,
shuffle=False,
verbose=0) #callbacks=[eval_map])
print 'Iter:%d\tloss=%.6f' % (i_e, history.history['loss'][0])
for tag, generator in eval_gen.items():
#print('test tag: ', tag)
genfun = generator.get_batch_generator()
# print '[%s]\t[Eval:%s]' % (time.strftime('%m-%d-%Y %H:%M:%S', time.localtime(time.time())), tag),
# res = dict([[k,0.] for k in eval_metrics.keys()])
res_scores = {
} # 2D dict; key qid-did ;value: predict_score, ground_truth
for input_data, y_true in genfun:
y_pred = model.predict(input_data, batch_size=len(y_true))
if issubclass(type(generator),
inputs.list_generator.ListBasicGenerator):
list_counts = input_data[
'list_counts'] # list_counts store the boundries between documents under different queries
y_pred = np.squeeze(y_pred)
for lc_idx in range(len(list_counts) - 1):
pre = list_counts[lc_idx]
suf = list_counts[lc_idx + 1]
for p, y, t in zip(input_data['ID'][pre:suf],
y_pred[pre:suf], y_true[pre:suf]):
if p[0] not in res_scores:
res_scores[p[0]] = {}
res_scores[p[0]][p[1]] = (y, t)
else:
NameError('not supported in this version!')
generator.reset()
sys.stdout.flush()
# save predicted score files for valid/test data
if (i_e + 1) % save_weights_iters == 0:
score_list = []
with open(
output_conf['predict']['save_path_during_train'] +
'-' + tag + '.' + str(i_e + 1), 'w') as f:
for qid, dinfo in res_scores.items():
dinfo = sorted(dinfo.items(),
key=lambda d: d[1][0],
reverse=True)
for inum, (did, (score, gt)) in enumerate(dinfo):
score_l = '%s\tQ0\t%s\t%d\t%f\t%s\t%s' % (
qid, did, inum, score, config['net_name'], gt)
print >> f, score_l
score_list.append(score_l)
# compute BLEU/ROUGE metrics at this check point
ref_list = test_ref_list if tag == 'test' else valid_ref_list
bleu_rouge_metrics = compute_bleu_rouge_given_scores_in_train(
score_list, corpus_dict, ref_list, tag)
print '[%s]\t[Eval:%s] Iter:%d\t(bleu1-4 corpus_bleu rougel dist1 dist2 avglen)\t%s' \
% (time.strftime('%m-%d-%Y %H:%M:%S', time.localtime(time.time())), tag, i_e+1, bleu_rouge_metrics)
if (
i_e + 1
) % save_weights_iters and is_save_weights == "1": # add an option to control saving weight files or not
model.save_weights(weights_file % (i_e + 1))
def train(config):
print(json.dumps(config, indent=2), end='\n')
# read basic config
global_conf = config["global"]
weights_file = str(global_conf['weights_file']) + '.%d'
display_interval = int(global_conf['display_interval'])
num_iters = int(global_conf['num_iters'])
save_weights_iters = int(global_conf['save_weights_iters'])
# read input config
input_conf = config['inputs']
share_input_conf = input_conf['share']
# collect embedding
if 'embed_path' in share_input_conf:
embed_dict = read_embedding(filename=share_input_conf['embed_path'])
_PAD_ = share_input_conf['vocab_size'] - 1
embed_dict[_PAD_] = np.zeros((share_input_conf['embed_size'], ),
dtype=np.float32)
embed = np.float32(
np.random.uniform(-0.2, 0.2, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = convert_embed_2_numpy(embed_dict,
embed=embed)
else:
embed = np.float32(
np.random.uniform(-0.2, 0.2, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = embed
print('[Embedding] Embedding Load Done.', end='\n')
# list all input tags and construct tags config
input_train_conf = OrderedDict()
input_eval_conf = OrderedDict()
for tag in input_conf.keys():
if 'phase' not in input_conf[tag]:
continue
if input_conf[tag]['phase'] == 'TRAIN':
input_train_conf[tag] = {}
input_train_conf[tag].update(share_input_conf)
input_train_conf[tag].update(input_conf[tag])
elif input_conf[tag]['phase'] == 'EVAL':
input_eval_conf[tag] = {}
input_eval_conf[tag].update(share_input_conf)
input_eval_conf[tag].update(input_conf[tag])
print('[Input] Process Input Tags. %s in TRAIN, %s in EVAL.' %
(input_train_conf.keys(), input_eval_conf.keys()),
end='\n')
# collect dataset identification
dataset = {}
for tag in input_conf:
if tag != 'share' and input_conf[tag]['phase'] == 'PREDICT':
continue
if 'text1_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text1_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
if 'text2_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text2_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
print('[Dataset] %s Dataset Load Done.' % len(dataset), end='\n')
# initial data generator
train_gen = OrderedDict()
eval_gen = OrderedDict()
for tag, conf in input_train_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
train_gen[tag] = generator(config=conf)
for tag, conf in input_eval_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
eval_gen[tag] = generator(config=conf)
######### Load Model #########
zmodel, kmodel = load_model(config)
input = Input(name='input', shape=(2, 50))
timeDistributed = TimeDistributed(layer=zmodel, input_shape=(2, 50))(input)
z_knrm_model = Model(input=input, output=timeDistributed)
eval_metrics = OrderedDict()
for mobj in config['metrics']:
mobj = mobj.lower()
if '@' in mobj:
mt_key, mt_val = mobj.split('@', 1)
eval_metrics[mobj] = metrics.get(mt_key)(int(mt_val))
else:
eval_metrics[mobj] = metrics.get(mobj)
epoch_num = 400
batch_size = 200 # take a look at the config
batch_num_per_epoch = 10
#train_as_whole(z_knrm_model, zmodel, train_gen, eval_gen, eval_metrics)
z_knrm_model.set_tensorboard("/tmp/matchzoo", "knrm-sgd-1e4")
# train_per_epoch(z_knrm_model, zmodel, train_gen, eval_gen, eval_metrics, optimMethod=SGD(1e-4))
train_per_epoch(z_knrm_model,
zmodel,
train_gen,
eval_gen,
eval_metrics,
optimMethod=SGD(1e-4,
leaningrate_schedule=Poly(0.5, 50 * 400)))
def train(config, para_path):
print(json.dumps(config, indent=2), end='\n')
# read basic config
global_conf = config["global"]
optimizer = global_conf['optimizer']
optimizer = optimizers.get(optimizer)
K.set_value(optimizer.lr, global_conf['learning_rate'])
#weights_file = str(global_conf['weights_file']) + '.%d'
display_interval = int(global_conf['display_interval'])
num_iters = int(global_conf['num_iters'])
save_weights_iters = int(global_conf['save_weights_iters'])
# read input config
input_conf = config['inputs']
share_input_conf = input_conf['share']
#an_config = json.load(open('./data/pinfo/config.py', 'r'))
an_config = json.load(open(para_path, 'r'))
dstdir = an_config["model_dst_dir"]
if not os.path.exists(an_config['weights_dir']):
os.mkdir(an_config['weights_dir'])
weights_file = an_config['weights_dir'] + str(global_conf['weights_file'])
config['metrics'] = an_config["metrics"]
config['model']['model_path'] = an_config['model_path']
share_input_conf['embed_path'] = dstdir + "embed_glove_d300"
share_input_conf[
'word_triletter_map_file'] = dstdir + "word_triletter_map.txt"
share_input_conf['vocab_size'] = word_len(dstdir + "word_dict.txt")
share_input_conf['text1_corpus'] = dstdir + "corpus_preprocessed.txt"
share_input_conf['text2_corpus'] = dstdir + "corpus_preprocessed.txt"
input_conf['train']['relation_file'] = dstdir + "relation_train.txt"
input_conf['valid']['relation_file'] = dstdir + "relation_valid.txt"
input_conf['test']['relation_file'] = dstdir + "relation_test.txt"
input_conf['train'][
'hist_feats_file'] = dstdir + "relation_train.binsum-20.txt"
input_conf['valid'][
'hist_feats_file'] = dstdir + "relation_valid.binsum-20.txt"
input_conf['test'][
'hist_feats_file'] = dstdir + "relation_test.binsum-20.txt"
# collect embedding
if 'embed_path' in share_input_conf:
embed_dict = read_embedding(filename=share_input_conf['embed_path'])
_PAD_ = share_input_conf['vocab_size'] - 1
embed_dict[_PAD_] = np.zeros((share_input_conf['embed_size'], ),
dtype=np.float32)
embed = np.float32(
np.random.uniform(-0.2, 0.2, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = convert_embed_2_numpy(embed_dict,
embed=embed)
else:
# if no embed provided, use random
embed = np.float32(
np.random.uniform(-0.2, 0.2, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = embed
print('[Embedding] Embedding Load Done.', end='\n')
# list all input tags and construct tags config
input_train_conf = OrderedDict()
input_eval_conf = OrderedDict()
# print("input_conf", input_conf)
# print("input_conf keys", input_conf.keys())
for tag in input_conf.keys():
if 'phase' not in input_conf[tag]:
continue
if input_conf[tag]['phase'] == 'TRAIN':
input_train_conf[tag] = {}
input_train_conf[tag].update(share_input_conf)
input_train_conf[tag].update(input_conf[tag])
elif input_conf[tag]['phase'] == 'EVAL':
input_eval_conf[tag] = {}
input_eval_conf[tag].update(share_input_conf)
input_eval_conf[tag].update(input_conf[tag])
print('[Input] Process Input Tags. %s in TRAIN, %s in EVAL.' %
(input_train_conf.keys(), input_eval_conf.keys()),
end='\n')
# print("input_train_conf", input_train_conf)
# collect dataset identification
dataset = {}
for tag in input_conf:
if tag != 'share' and input_conf[tag]['phase'] == 'PREDICT':
continue
if 'text1_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text1_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
if 'text2_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text2_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
print('[Dataset] %s Dataset Load Done.' % len(dataset), end='\n')
# initial data generator
train_gen = OrderedDict()
eval_gen = OrderedDict()
for tag, conf in input_train_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
train_gen[tag] = generator(config=conf)
for tag, conf in input_eval_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
eval_gen[tag] = generator(config=conf)
######### Load Model #########
model = load_model(config)
# weights_file1 = str(global_conf['weights_file']) + '.' + str(global_conf['test_weights_iters'])
# model.load_weights(weights_file1)
loss = []
for lobj in config['losses']:
if lobj['object_name'] in mz_specialized_losses:
loss.append(
rank_losses.get(lobj['object_name'])(lobj['object_params']))
else:
loss.append(rank_losses.get(lobj['object_name']))
eval_metrics = OrderedDict()
for mobj in config['metrics']:
mobj = mobj.lower()
if '@' in mobj:
mt_key, mt_val = mobj.split('@', 1)
eval_metrics[mobj] = metrics.get(mt_key)(int(mt_val))
else:
eval_metrics[mobj] = metrics.get(mobj)
model.compile(optimizer=optimizer, loss=loss)
print('[Model] Model Compile Done.', end='\n')
base_metric = an_config["base_metric"]
best_epoch = 0
best_metric = -1
best_result = ''
start_time = time.clock()
for i_e in range(num_iters):
for tag, generator in train_gen.items():
genfun = generator.get_batch_generator()
print('[%s]\t[Train:%s] ' % (time.strftime(
'%m-%d-%Y %H:%M:%S', time.localtime(time.time())), tag),
end='')
history = model.fit_generator(genfun,
steps_per_epoch=display_interval,
epochs=1,
shuffle=False,
verbose=0) #callbacks=[eval_map])
print('Iter:%d\tloss=%.6f' % (i_e, history.history['loss'][0]),
end='\n')
for tag, generator in eval_gen.items():
genfun = generator.get_batch_generator()
print('[%s]\t[Eval:%s] ' % (time.strftime(
'%m-%d-%Y %H:%M:%S', time.localtime(time.time())), tag),
end='')
res = dict([[k, 0.] for k in eval_metrics.keys()])
num_valid = 0
for input_data, y_true in genfun:
y_pred = model.predict(input_data, batch_size=len(y_true))
if issubclass(type(generator),
inputs.list_generator.ListBasicGenerator):
list_counts = input_data['list_counts']
for k, eval_func in eval_metrics.items():
for lc_idx in range(len(list_counts) - 1):
pre = list_counts[lc_idx]
suf = list_counts[lc_idx + 1]
res[k] += eval_func(y_true=y_true[pre:suf],
y_pred=y_pred[pre:suf])
num_valid += len(list_counts) - 1
else:
for k, eval_func in eval_metrics.items():
res[k] += eval_func(y_true=y_true, y_pred=y_pred)
num_valid += 1
generator.reset()
print('Iter:%d\t%s' % (i_e, '\t'.join(
['%s=%f' % (k, v / num_valid) for k, v in res.items()])),
end='\n')
cur_metric = res[base_metric] / num_valid
cur_res = '\t'.join(
['%s=%f' % (k, v / num_valid) for k, v in res.items()])
cur_metric_ls = {}
for k, v in res.items():
cur_metric_ls[k] = round(v / num_valid, 4)
if cur_metric > best_metric and tag == 'valid':
best_epoch = i_e
best_metric = cur_metric
best_result = cur_res
best_metric_ls = cur_metric_ls
model.save_weights(weights_file)
sys.stdout.flush()
#if (i_e+1) % save_weights_iters == 0:
#model.save_weights(weights_file % (i_e+1))
end_time = time.clock()
print('the best running result %s the best epoch %d' %
(best_result, best_epoch))
print('the running time %s seconds' % (end_time - start_time))
db.insert_result(task_id, model_id, best_metric_ls)
def train(config):
print(json.dumps(config, indent=2), end='\n')
# read basic config
global_conf = config["global"]
optimizer = global_conf['optimizer']
optimizer=optimizers.get(optimizer)
K.set_value(optimizer.lr, global_conf['learning_rate'])
weights_file = str(global_conf['weights_file']) + '.%d'
display_interval = int(global_conf['display_interval'])
num_iters = int(global_conf['num_iters'])
save_weights_iters = int(global_conf['save_weights_iters'])
# read input config
input_conf = config['inputs']
share_input_conf = input_conf['share']
# collect embedding
if 'embed_path' in share_input_conf:
embed_dict = read_embedding(filename=share_input_conf['embed_path'])
_PAD_ = share_input_conf['vocab_size'] - 1
embed_dict[_PAD_] = np.zeros((share_input_conf['embed_size'], ), dtype=np.float32)
embed = np.float32(np.random.uniform(-0.2, 0.2, [share_input_conf['vocab_size'], share_input_conf['embed_size']]))
share_input_conf['embed'] = convert_embed_2_numpy(embed_dict, embed = embed)
else:
embed = np.float32(np.random.uniform(-0.2, 0.2, [share_input_conf['vocab_size'], share_input_conf['embed_size']]))
share_input_conf['embed'] = embed
print('[Embedding] Embedding Load Done.', end='\n')
# list all input tags and construct tags config
input_train_conf = OrderedDict()
input_eval_conf = OrderedDict()
for tag in input_conf.keys():
if 'phase' not in input_conf[tag]:
continue
if input_conf[tag]['phase'] == 'TRAIN':
input_train_conf[tag] = {}
input_train_conf[tag].update(share_input_conf)
input_train_conf[tag].update(input_conf[tag])
elif input_conf[tag]['phase'] == 'EVAL':
input_eval_conf[tag] = {}
input_eval_conf[tag].update(share_input_conf)
input_eval_conf[tag].update(input_conf[tag])
print('[Input] Process Input Tags. %s in TRAIN, %s in EVAL.' % (input_train_conf.keys(), input_eval_conf.keys()), end='\n')
# collect dataset identification
dataset = {}
for tag in input_conf:
if tag != 'share' and input_conf[tag]['phase'] == 'PREDICT':
continue
if 'text1_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text1_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
if 'text2_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text2_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
print('[Dataset] %s Dataset Load Done.' % len(dataset), end='\n')
# initial data generator
train_gen = OrderedDict()
eval_gen = OrderedDict()
for tag, conf in input_train_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
train_gen[tag] = generator( config = conf )
for tag, conf in input_eval_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
eval_gen[tag] = generator( config = conf )
######### Load Model #########
model = load_model(config)
loss = []
for lobj in config['losses']:
if lobj['object_name'] in mz_specialized_losses:
loss.append(rank_losses.get(lobj['object_name'])(lobj['object_params']))
else:
loss.append(rank_losses.get(lobj['object_name']))
eval_metrics = OrderedDict()
for mobj in config['metrics']:
mobj = mobj.lower()
if '@' in mobj:
mt_key, mt_val = mobj.split('@', 1)
eval_metrics[mobj] = metrics.get(mt_key)(int(mt_val))
else:
eval_metrics[mobj] = metrics.get(mobj)
model.compile(optimizer=optimizer, loss=loss)
print('[Model] Model Compile Done.', end='\n')
for i_e in range(num_iters):
for tag, generator in train_gen.items():
genfun = generator.get_batch_generator()
print('[%s]\t[Train:%s] ' % (time.strftime('%m-%d-%Y %H:%M:%S', time.localtime(time.time())), tag), end='')
history = model.fit_generator(
genfun,
steps_per_epoch = display_interval,
epochs = 1,
shuffle=False,
verbose = 0
) #callbacks=[eval_map])
print('Iter:%d\tloss=%.6f' % (i_e, history.history['loss'][0]), end='\n')
for tag, generator in eval_gen.items():
genfun = generator.get_batch_generator()
print('[%s]\t[Eval:%s] ' % (time.strftime('%m-%d-%Y %H:%M:%S', time.localtime(time.time())), tag), end='')
res = dict([[k,0.] for k in eval_metrics.keys()])
num_valid = 0
for input_data, y_true in genfun:
y_pred = model.predict(input_data, batch_size=len(y_true))
if issubclass(type(generator), inputs.list_generator.ListBasicGenerator):
list_counts = input_data['list_counts']
for k, eval_func in eval_metrics.items():
for lc_idx in range(len(list_counts)-1):
pre = list_counts[lc_idx]
suf = list_counts[lc_idx+1]
res[k] += eval_func(y_true = y_true[pre:suf], y_pred = y_pred[pre:suf])
num_valid += len(list_counts) - 1
else:
for k, eval_func in eval_metrics.items():
res[k] += eval_func(y_true = y_true, y_pred = y_pred)
num_valid += 1
generator.reset()
print('Iter:%d\t%s' % (i_e, '\t'.join(['%s=%f'%(k,v/num_valid) for k, v in res.items()])), end='\n')
sys.stdout.flush()
if (i_e+1) % save_weights_iters == 0:
model.save_weights(weights_file % (i_e+1))
def predict(config):
######## Read input config ########
print(json.dumps(config, indent=2), end='\n')
input_conf = config['inputs']
share_input_conf = input_conf['share']
# collect embedding
if 'embed_path' in share_input_conf:
embed_dict = read_embedding(filename=share_input_conf['embed_path'])
_PAD_ = share_input_conf['vocab_size'] - 1
embed_dict[_PAD_] = np.zeros((share_input_conf['embed_size'], ), dtype=np.float32)
embed = np.float32(np.random.uniform(-0.02, 0.02, [share_input_conf['vocab_size'], share_input_conf['embed_size']]))
share_input_conf['embed'] = convert_embed_2_numpy(embed_dict, embed = embed)
else:
embed = np.float32(np.random.uniform(-0.2, 0.2, [share_input_conf['vocab_size'], share_input_conf['embed_size']]))
share_input_conf['embed'] = embed
print('[Embedding] Embedding Load Done.', end='\n')
# list all input tags and construct tags config
input_predict_conf = OrderedDict()
for tag in input_conf.keys():
if 'phase' not in input_conf[tag]:
continue
if input_conf[tag]['phase'] == 'PREDICT':
input_predict_conf[tag] = {}
input_predict_conf[tag].update(share_input_conf)
input_predict_conf[tag].update(input_conf[tag])
print('[Input] Process Input Tags. %s in PREDICT.' % (input_predict_conf.keys()), end='\n')
# collect dataset identification
dataset = {}
for tag in input_conf:
if tag == 'share' or input_conf[tag]['phase'] == 'PREDICT':
if 'text1_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text1_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
if 'text2_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text2_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
print('[Dataset] %s Dataset Load Done.' % len(dataset), end='\n')
# initial data generator
predict_gen = OrderedDict()
for tag, conf in input_predict_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
predict_gen[tag] = generator(
#data1 = dataset[conf['text1_corpus']],
#data2 = dataset[conf['text2_corpus']],
config = conf )
######## Read output config ########
output_conf = config['outputs']
######## Load Model ########
global_conf = config["global"]
weights_file = str(global_conf['weights_file']) + '.' + str(global_conf['test_weights_iters'])
model = load_model(config)
model.load_weights(weights_file)
eval_metrics = OrderedDict()
for mobj in config['metrics']:
mobj = mobj.lower()
if '@' in mobj:
mt_key, mt_val = mobj.split('@', 1)
eval_metrics[mobj] = metrics.get(mt_key)(int(mt_val))
else:
eval_metrics[mobj] = metrics.get(mobj)
res = dict([[k,0.] for k in eval_metrics.keys()])
for tag, generator in predict_gen.items():
genfun = generator.get_batch_generator()
print('[%s]\t[Predict] @ %s ' % (time.strftime('%m-%d-%Y %H:%M:%S', time.localtime(time.time())), tag), end='')
num_valid = 0
res_scores = {}
for input_data, y_true in genfun:
y_pred = model.predict(input_data, batch_size=len(y_true) )
if issubclass(type(generator), inputs.list_generator.ListBasicGenerator):
list_counts = input_data['list_counts']
for k, eval_func in eval_metrics.items():
for lc_idx in range(len(list_counts)-1):
pre = list_counts[lc_idx]
suf = list_counts[lc_idx+1]
res[k] += eval_func(y_true = y_true[pre:suf], y_pred = y_pred[pre:suf])
y_pred = np.squeeze(y_pred)
for lc_idx in range(len(list_counts)-1):
pre = list_counts[lc_idx]
suf = list_counts[lc_idx+1]
for p, y, t in zip(input_data['ID'][pre:suf], y_pred[pre:suf], y_true[pre:suf]):
if p[0] not in res_scores:
res_scores[p[0]] = {}
res_scores[p[0]][p[1]] = (y, t)
num_valid += len(list_counts) - 1
else:
for k, eval_func in eval_metrics.items():
res[k] += eval_func(y_true = y_true, y_pred = y_pred)
for p, y, t in zip(input_data['ID'], y_pred, y_true):
if p[0] not in res_scores:
res_scores[p[0]] = {}
res_scores[p[0]][p[1]] = (y[1], t[1])
num_valid += 1
generator.reset()
if tag in output_conf:
if output_conf[tag]['save_format'] == 'TREC':
with open(output_conf[tag]['save_path'], 'w') as f:
for qid, dinfo in res_scores.items():
dinfo = sorted(dinfo.items(), key=lambda d:d[1][0], reverse=True)
for inum,(did, (score, gt)) in enumerate(dinfo):
f.write('%s\tQ0\t%s\t%d\t%f\t%s\t%s\n'%(qid, did, inum, score, config['net_name'], gt))
elif output_conf[tag]['save_format'] == 'TEXTNET':
with open(output_conf[tag]['save_path'], 'w') as f:
for qid, dinfo in res_scores.items():
dinfo = sorted(dinfo.items(), key=lambda d:d[1][0], reverse=True)
for inum,(did, (score, gt)) in enumerate(dinfo):
f.write('%s %s %s %s\n'%(gt, qid, did, score))
print('[Predict] results: ', '\t'.join(['%s=%f'%(k,v/num_valid) for k, v in res.items()]), end='\n')
sys.stdout.flush()
def predict(config):
######## Read input config ########
print(json.dumps(config, indent=2), end='\n')
input_conf = config['inputs']
share_input_conf = input_conf['share']
# collect embedding
if 'embed_path' in share_input_conf:
embed_dict = read_embedding(filename=share_input_conf['embed_path'])
_PAD_ = share_input_conf['vocab_size'] - 1
embed_dict[_PAD_] = np.zeros((share_input_conf['embed_size'], ),
dtype=np.float32)
embed = np.float32(
np.random.uniform(-0.02, 0.02, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = convert_embed_2_numpy(embed_dict,
embed=embed)
else:
embed = np.float32(
np.random.uniform(-0.2, 0.2, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = embed
print('[Embedding] Embedding Load Done.', end='\n')
if 'pos_embed_path' in share_input_conf:
embed_dict = read_embedding(
filename=share_input_conf['pos_embed_path'])
_PAD_ = share_input_conf['pos_vocab_size'] - 1
embed_dict[_PAD_] = np.zeros((share_input_conf['pos_embed_size'], ),
dtype=np.float32)
embed = np.float32(
np.random.uniform(-0.2, 0.2, [
share_input_conf['pos_vocab_size'],
share_input_conf['pos_embed_size']
]))
share_input_conf['pos_embed'] = convert_embed_2_numpy(embed_dict,
embed=embed)
print('[Embedding] POS Embedding Load Done.', end='\n')
# list all input tags and construct tags config
input_predict_conf = OrderedDict()
for tag in input_conf.keys():
if 'phase' not in input_conf[tag]:
continue
if input_conf[tag]['phase'] == 'PREDICT':
input_predict_conf[tag] = {}
input_predict_conf[tag].update(share_input_conf)
input_predict_conf[tag].update(input_conf[tag])
print('[Input] Process Input Tags. %s in PREDICT.' %
(input_predict_conf.keys()),
end='\n')
# collect dataset identification
dataset = {}
for tag in input_conf:
if tag == 'share' or input_conf[tag]['phase'] == 'PREDICT':
if 'text1_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text1_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
if 'text2_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text2_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
if 'text1_postag_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text1_postag_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
if 'text2_postag_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text2_postag_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
print('[Dataset] %s Dataset Load Done.' % len(dataset), end='\n')
# initial data generator
predict_gen = OrderedDict()
for tag, conf in input_predict_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
if 'text1_postag_corpus' in conf:
conf['postag_data1'] = dataset[conf['text1_postag_corpus']]
if 'text2_postag_corpus' in conf:
conf['postag_data2'] = dataset[conf['text2_postag_corpus']]
generator = inputs.get(conf['input_type'])
predict_gen[tag] = generator(
#data1 = dataset[conf['text1_corpus']],
#data2 = dataset[conf['text2_corpus']],
config=conf)
######## Read output config ########
output_conf = config['outputs']
######## Load Model ########
global_conf = config["global"]
weights_file = str(global_conf['weights_file']) + '.' + str(
global_conf['test_weights_iters'])
model = load_model(config)
model.load_weights(weights_file)
generator = predict_gen['predict']
input_data, y_true = generator.get_batch_generator().next()
term_list1 = 'Double dopaminergic thistle'
term_list2 = 'completes herbs textures topical'
input_data = InputTransformer(config).build().genr_input(
term_list1, term_list2)
y_pred = model.predict(input_data)
return y_pred
def train(config):
#json.dumps()用于将dict类型的数据转成str，因为如果直接将dict类型的数据写入json文件中会发生报错，因此在将数据写入时需要用到该函数
print(json.dumps(config, indent=2), end='\n')
# read basic config
global_conf = config["global"]
optimizer = global_conf['optimizer']
optimizer = optimizers.get(optimizer) #总是调用keras.optimizers
K.set_value(
optimizer.lr,
global_conf['learning_rate']) #使用 Numpy 数组设置变量的值. lr:learning rate
weights_file = str(global_conf['weights_file']) + '.%d'
display_interval = int(global_conf['display_interval'])
num_iters = int(global_conf['num_iters'])
save_weights_iters = int(global_conf['save_weights_iters'])
# read input config
input_conf = config['inputs']
share_input_conf = input_conf['share']
# collect embedding
if 'embed_path' in share_input_conf:
embed_dict = read_embedding(filename=share_input_conf['embed_path'])
_PAD_ = share_input_conf['vocab_size'] - 1
embed_dict[_PAD_] = np.zeros((share_input_conf['embed_size'], ),
dtype=np.float32)
embed = np.float32(
np.random.uniform(-0.2, 0.2, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = convert_embed_2_numpy(embed_dict,
embed=embed)
else:
embed = np.float32(
np.random.uniform(-0.2, 0.2, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = embed
print('[Embedding] Embedding Load Done.', end='\n')
# list all input tags and construct tags config
input_train_conf = OrderedDict() #使用OrderedDict会根据放入元素的先后顺序进行排序
input_eval_conf = OrderedDict()
for tag in input_conf.keys():
if 'phase' not in input_conf[tag]:
continue
if input_conf[tag]['phase'] == 'TRAIN':
input_train_conf[tag] = {}
input_train_conf[tag].update(share_input_conf)
input_train_conf[tag].update(input_conf[tag])
elif input_conf[tag]['phase'] == 'EVAL':
input_eval_conf[tag] = {}
input_eval_conf[tag].update(share_input_conf)
input_eval_conf[tag].update(input_conf[tag])
print(
'[Input] Process Input Tags. %s in TRAIN, %s in EVAL.' %
(input_train_conf.keys(), input_eval_conf.keys()),
end='\n'
) #odict_keys(['train']) in TRAIN, odict_keys(['valid', 'test']) in EVAL.
# collect dataset identification
dataset = {}
for tag in input_conf:
if tag != 'share' and input_conf[tag]['phase'] == 'PREDICT':
continue
if 'text1_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text1_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
if 'text2_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text2_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
print('[Dataset] %s Dataset Load Done.' % len(dataset), end='\n')
# initial data generator
train_gen = OrderedDict()
eval_gen = OrderedDict()
for tag, conf in input_train_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
train_gen[tag] = generator(config=conf)
for tag, conf in input_eval_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
eval_gen[tag] = generator(config=conf)
######### Load Model #########
model = load_model(config)
loss = []
for lobj in config['losses']:
if lobj['object_name'] in mz_specialized_losses:
loss.append(
rank_losses.get(lobj['object_name'])(lobj['object_params']))
else:
loss.append(rank_losses.get(lobj['object_name']))
eval_metrics = OrderedDict()
for mobj in config['metrics']:
mobj = mobj.lower()
if '@' in mobj:
mt_key, mt_val = mobj.split('@', 1)
eval_metrics[mobj] = metrics.get(mt_key)(int(mt_val))
else:
eval_metrics[mobj] = metrics.get(mobj)
model.compile(optimizer=optimizer, loss=loss)
print('[Model] Model Compile Done.', end='\n')
#add tensorboard check
# board = keras.callbacks.TensorBoard(log_dir='../data/toy_example/logs', histogram_freq=0)
# history = LossHistory()
for i_e in range(num_iters): #num_iters类似epochs
for tag, generator in train_gen.items():
#genfun生成器生成batch_size*2个样本（一半正样本，一半负样本）
#display_interval = len(pair_list)//(batch_size*2)
genfun = generator.get_batch_generator()
print('[%s]\t[Train:%s] ' % (time.strftime(
'%m-%d-%Y %H:%M:%S', time.localtime(time.time())), tag),
end='')
history = model.fit_generator(
genfun,
steps_per_epoch=display_interval,
epochs=1,
shuffle=False,
verbose=0,
#callbacks = [history, board]
) #callbacks=[eval_map])
print('Iter:%d\tloss=%.6f' % (i_e, history.history['loss'][0]),
end='\n')
for tag, generator in eval_gen.items():
genfun = generator.get_batch_generator()
print('[%s]\t[Eval:%s] ' % (time.strftime(
'%m-%d-%Y %H:%M:%S', time.localtime(time.time())), tag),
end='')
res = dict([[k, 0.] for k in eval_metrics.keys()])
num_valid = 0
for input_data, y_true in genfun:
y_pred = model.predict(input_data, batch_size=len(y_true))
if issubclass(type(generator),
inputs.list_generator.ListBasicGenerator):
list_counts = input_data['list_counts']
for k, eval_func in eval_metrics.items():
for lc_idx in range(len(list_counts) - 1):
pre = list_counts[lc_idx]
suf = list_counts[lc_idx + 1]
res[k] += eval_func(y_true=y_true[pre:suf],
y_pred=y_pred[pre:suf])
num_valid += len(list_counts) - 1
else:
for k, eval_func in eval_metrics.items():
res[k] += eval_func(y_true=y_true, y_pred=y_pred)
num_valid += 1
generator.reset()
print('Iter:%d\t%s' % (i_e, '\t'.join(
['%s=%f' % (k, v / num_valid) for k, v in res.items()])),
end='\n')
sys.stdout.flush()
if (i_e + 1) % save_weights_iters == 0:
model.save_weights(weights_file % (i_e + 1))
dataset[datapath], _ = read_data(datapath)
if 'text2_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text2_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
print('[Dataset] %s Dataset Load Done.' % len(dataset), end='\n')
# initial data generator
train_gen = OrderedDict()
eval_gen = OrderedDict()
for tag, conf in input_train_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
<<<<<<< HEAD
train_gen[tag] = generator( config = conf )
=======
train_gen[tag] = generator(config=conf)
>>>>>>> 6636718fe1739e29021c42bc19be0f43de359b94
for tag, conf in input_eval_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type']) # 获取对应的generator
<<<<<<< HEAD
eval_gen[tag] = generator( config = conf ) # 通过对应的generator加载数据，获取 X1, X1_len, X2, X2_len, Y
=======
eval_gen[tag] = generator(config=conf) # 通过对应的generator加载数据，获取 X1, X1_len, X2, X2_len, Y
def predict(config):
######## Read input config ########
print(json.dumps(config, indent=2))
input_conf = config['inputs']
share_input_conf = input_conf['share']
# collect embedding
if 'embed_path' in share_input_conf:
embed_dict = read_embedding(filename=share_input_conf['embed_path'])
_PAD_ = share_input_conf['fill_word']
embed_dict[_PAD_] = np.zeros((share_input_conf['embed_size'], ),
dtype=np.float32)
embed = np.float32(
np.random.uniform(-0.02, 0.02, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = convert_embed_2_numpy(embed_dict,
embed=embed)
else:
embed = np.float32(
np.random.uniform(-0.2, 0.2, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = embed
print '[Embedding] Embedding Load Done.'
# list all input tags and construct tags config
input_predict_conf = OrderedDict()
for tag in input_conf.keys():
if 'phase' not in input_conf[tag]:
continue
if input_conf[tag]['phase'] == 'PREDICT':
input_predict_conf[tag] = {}
input_predict_conf[tag].update(share_input_conf)
input_predict_conf[tag].update(input_conf[tag])
print '[Input] Process Input Tags. %s in PREDICT.' % (
input_predict_conf.keys())
# collect dataset identification
dataset = {}
for tag in input_conf:
if tag == 'share' or input_conf[tag]['phase'] == 'PREDICT':
if 'text1_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text1_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
if 'text2_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text2_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
print '[Dataset] %s Dataset Load Done.' % len(dataset)
# initial data generator
predict_gen = OrderedDict()
for tag, conf in input_predict_conf.items():
print conf
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
predict_gen[tag] = generator(
#data1 = dataset[conf['text1_corpus']],
#data2 = dataset[conf['text2_corpus']],
config=conf)
######## Read output config ########
output_conf = config['outputs']
######## Load Model ########
global_conf = config["global"]
weights_file = global_conf['weights_file']
model = load_model(config)
model.load_weights(weights_file)
eval_metrics = OrderedDict()
for mobj in config['metrics']:
mobj = mobj.lower()
if '@' in mobj:
mt_key, mt_val = mobj.split('@', 1)
eval_metrics[mobj] = metrics.get(mt_key)(int(mt_val))
else:
eval_metrics[mobj] = metrics.get(mobj)
res = dict([[k, 0.] for k in eval_metrics.keys()])
for tag, generator in predict_gen.items():
genfun = generator.get_batch_generator()
print '[Predict] @ %s ' % tag,
num_valid = 0
res_scores = {}
for input_data, y_true in genfun:
list_counts = input_data['list_counts']
y_pred = model.predict(input_data, batch_size=len(y_true))
for k, eval_func in eval_metrics.items():
for lc_idx in range(len(list_counts) - 1):
pre = list_counts[lc_idx]
suf = list_counts[lc_idx + 1]
res[k] += eval_func(y_true=y_true[pre:suf],
y_pred=y_pred[pre:suf])
y_pred = np.squeeze(y_pred)
for lc_idx in range(len(list_counts) - 1):
pre = list_counts[lc_idx]
suf = list_counts[lc_idx + 1]
for p, y, t in zip(input_data['ID'][pre:suf], y_pred[pre:suf],
y_true[pre:suf]):
if p[0] not in res_scores:
res_scores[p[0]] = {}
res_scores[p[0]][p[1]] = (y, t)
num_valid += len(list_counts) - 1
generator.reset()
if tag in output_conf:
if output_conf[tag]['save_format'] == 'TREC':
with open(output_conf[tag]['save_path'], 'w') as f:
for qid, dinfo in res_scores.items():
dinfo = sorted(dinfo.items(),
key=lambda d: d[1][0],
reverse=True)
for inum, (did, (score, gt)) in enumerate(dinfo):
print >> f, '%s\tQ0\t%s\t%d\t%f\t%s' % (
qid, did, inum, score, config['net_name'])
elif output_conf[tag]['save_format'] == 'TEXTNET':
with open(output_conf[tag]['save_path'], 'w') as f:
for qid, dinfo in res_scores.items():
dinfo = sorted(dinfo.items(),
key=lambda d: d[1][0],
reverse=True)
for inum, (did, (score, gt)) in enumerate(dinfo):
print >> f, '%s %s %s %s' % (gt, qid, did, score)
print '[Predict] results: ', ' '.join(
['%s:%f' % (k, v / num_valid) for k, v in res.items()])
sys.stdout.flush()
def predict(config):
######## Read input config ########
print(json.dumps(config, indent=2))
input_conf = config['inputs']
share_input_conf = input_conf['share']
# collect embedding
if 'embed_path' in share_input_conf:
embed_dict = read_embedding(filename=share_input_conf['embed_path'])
_PAD_ = share_input_conf['vocab_size'] - 1
embed_dict[_PAD_] = np.zeros((share_input_conf['embed_size'], ), dtype=np.float32)
embed = np.float32(np.random.uniform(-0.02, 0.02, [share_input_conf['vocab_size'], share_input_conf['embed_size']]))
share_input_conf['embed'] = convert_embed_2_numpy(embed_dict, embed = embed)
else:
embed = np.float32(np.random.uniform(-0.2, 0.2, [share_input_conf['vocab_size'], share_input_conf['embed_size']]))
share_input_conf['embed'] = embed
print '[Embedding] Embedding Load Done.'
# list all input tags and construct tags config
input_predict_conf = OrderedDict()
for tag in input_conf.keys():
if 'phase' not in input_conf[tag]:
continue
if input_conf[tag]['phase'] == 'PREDICT':
input_predict_conf[tag] = {}
input_predict_conf[tag].update(share_input_conf)
input_predict_conf[tag].update(input_conf[tag])
print '[Input] Process Input Tags. %s in PREDICT.' % (input_predict_conf.keys())
# collect dataset identification
dataset = {}
for tag in input_conf:
if tag == 'share' or input_conf[tag]['phase'] == 'PREDICT':
if 'text1_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text1_corpus']
if datapath not in dataset:
dataset[datapath] = read_data_2d(datapath)
if 'text2_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text2_corpus']
if datapath not in dataset:
dataset[datapath] = read_data_2d(datapath)
if 'qa_comat_file' in input_conf[tag]: # qa_comat_file for qa_cooccur_matrix in DMN_KD_CQA and DMN_KD_Web
datapath = input_conf[tag]['qa_comat_file']
if datapath not in dataset:
dataset[datapath] = read_qa_comat(datapath)
print '[Dataset] %s Dataset Load Done.' % len(dataset)
# initial data generator
predict_gen = OrderedDict()
for tag, conf in input_predict_conf.items():
print conf
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
if 'qa_comat_file' in share_input_conf:
conf['qa_comat'] = dataset[conf['qa_comat_file']]
generator = inputs.get(conf['input_type'])
predict_gen[tag] = generator(
#data1 = dataset[conf['text1_corpus']],
#data2 = dataset[conf['text2_corpus']],
config = conf )
######## Read output config ########
output_conf = config['outputs']
######## Load Model ########
global_conf = config["global"]
weights_file = str(global_conf['weights_file']) + '.' + str(global_conf['test_weights_iters']) + '-' + str(seed)
if config['net_name'] == 'DMN_CNN_MTL':
model, model_clf = load_model(config)
model.load_weights(weights_file)
elif config['net_name'] == 'DMN_CNN_INTENTS':
model_clf = load_model(config)
model_clf.load_weights(weights_file)
elif config['net_name'] == 'DMN_CNN_MTL_Web' or config['net_name'] == 'DMN_CNN_MTL_Web_v2':
model, model_web = load_model(config)
model.load_weights(weights_file)
weights_file_web = str(global_conf['weights_file_web']) + '.' + str(global_conf['test_weights_iters']) + '-' + str(seed)
model_web.load_weights(weights_file_web)
elif config['net_name'] == 'DMN_CNN_MTL_All':
model, model_web, model_clf = load_model(config)
model.load_weights(weights_file)
weights_file_web = str(global_conf['weights_file_web']) + '.' + str(
global_conf['test_weights_iters']) + '-' + str(seed)
model_web.load_weights(weights_file_web)
else:
model = load_model(config)
model.load_weights(weights_file)
eval_metrics = OrderedDict()
for mobj in config['metrics']:
mobj = mobj.lower()
if '@' in mobj:
mt_key, mt_val = mobj.split('@', 1)
eval_metrics[mobj] = metrics.get(mt_key)(int(mt_val))
else:
eval_metrics[mobj] = metrics.get(mobj)
res = dict([[k,0.] for k in eval_metrics.keys()])
for tag, generator in predict_gen.items():
genfun = generator.get_batch_generator()
print '[%s]\t[Predict] @ %s ' % (time.strftime('%m-%d-%Y %H:%M:%S', time.localtime(time.time())), tag),
num_valid = 0
res_scores = {}
if tag == 'predict':
model_to_evaluate = model
elif tag == 'predict_clf':
model_to_evaluate = model_clf
elif tag == 'predict_web':
model_to_evaluate = model_web
for input_data, y_true in genfun:
y_pred = model_to_evaluate.predict(input_data, batch_size=len(y_true))
if tag == 'predict_clf':
y_pred = np.argmax(y_pred, axis=1)
if issubclass(type(generator), inputs.list_generator.ListBasicGenerator):
list_counts = input_data['list_counts']
for k, eval_func in eval_metrics.items():
for lc_idx in range(len(list_counts)-1):
pre = list_counts[lc_idx]
suf = list_counts[lc_idx+1]
res[k] += eval_func(y_true = y_true[pre:suf], y_pred = y_pred[pre:suf])
y_pred = np.squeeze(y_pred)
for lc_idx in range(len(list_counts) - 1):
pre = list_counts[lc_idx]
suf = list_counts[lc_idx + 1]
for p, y, t in zip(input_data['ID'][pre:suf], y_pred[pre:suf], y_true[pre:suf]):
if tag == 'predict_clf':
res_scores[p[0]] = (y, t)
else:
if p[0] not in res_scores:
res_scores[p[0]] = {}
res_scores[p[0]][p[1]] = (y, t)
num_valid += len(list_counts) - 1
else:
for k, eval_func in eval_metrics.items():
res[k] += eval_func(y_true = y_true, y_pred = y_pred)
for p, y, t in zip(input_data['ID'], y_pred, y_true):
if p[0] not in res_scores:
res_scores[p[0]] = {}
res_scores[p[0]][p[1]] = (y[1], t[1])
num_valid += 1
generator.reset()
if tag in output_conf:
save_path = output_conf[tag]['save_path'] + '-' + str(seed)
if output_conf[tag]['save_format'] == 'TREC':
with open(save_path, 'w') as f:
if tag == 'predict_clf':
for qid, entry in res_scores.items():
print >> f, '%s\t%d\t%d'%(qid, entry[0], entry[1])
else:
for qid, dinfo in res_scores.items():
dinfo = sorted(dinfo.items(), key=lambda d:d[1][0], reverse=True)
for inum,(did, (score, gt)) in enumerate(dinfo):
print >> f, '%s\tQ0\t%s\t%d\t%f\t%s\t%s'%(qid, did, inum, score, config['net_name'], gt)
elif output_conf[tag]['save_format'] == 'TEXTNET':
with open(save_path, 'w') as f:
for qid, dinfo in res_scores.items():
dinfo = sorted(dinfo.items(), key=lambda d:d[1][0], reverse=True)
for inum,(did, (score, gt)) in enumerate(dinfo):
print >> f, '%s %s %s %s'%(gt, qid, did, score)
print '[Predict] results: ', '\t'.join(['%s=%f'%(k,v/num_valid) for k, v in res.items()])
sys.stdout.flush()
def predict(config):
######## Read input config ########
print(json.dumps(config, indent=2), end='\n')
input_conf = config['inputs']
share_input_conf = input_conf['share']
# collect embedding
if 'embed_path' in share_input_conf:
embed_dict = read_embedding(filename=share_input_conf['embed_path'])
_PAD_ = share_input_conf['vocab_size'] - 1
embed_dict[_PAD_] = np.zeros((share_input_conf['embed_size'], ),
dtype=np.float32)
embed = np.float32(
np.random.uniform(-0.02, 0.02, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = convert_embed_2_numpy(embed_dict,
embed=embed)
else:
embed = np.float32(
np.random.uniform(-0.2, 0.2, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = embed
print('[Embedding] Embedding Load Done.', end='\n')
# list all input tags and construct tags config
input_predict_conf = OrderedDict()
for tag in input_conf.keys():
if 'phase' not in input_conf[tag]:
continue
if input_conf[tag]['phase'] == 'PREDICT':
input_predict_conf[tag] = {}
input_predict_conf[tag].update(share_input_conf)
input_predict_conf[tag].update(input_conf[tag])
print('[Input] Process Input Tags. %s in PREDICT.' %
(input_predict_conf.keys()),
end='\n')
# collect dataset identification
dataset = {}
for tag in input_conf:
if tag == 'share' or input_conf[tag]['phase'] == 'PREDICT':
if 'text1_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text1_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
if 'text2_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text2_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
print('[Dataset] %s Dataset Load Done.' % len(dataset), end='\n')
# initial data generator
predict_gen = OrderedDict()
for tag, conf in input_predict_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
predict_gen[tag] = generator(
#data1 = dataset[conf['text1_corpus']],
#data2 = dataset[conf['text2_corpus']],
config=conf)
######## Read output config ########
output_conf = config['outputs']
######## Load Model ########
global_conf = config["global"]
weights_file = str(global_conf['weights_file']) + '.' + str(
global_conf['test_weights_iters'])
model = load_model(config)
model.load_weights(weights_file)
encoder = Model(inputs=model.input,
outputs=[
model.get_layer('att_layer_2').output,
model.get_layer('att_layer_3').output
])
# encoder = Model(inputs=model.input, outputs=model.get_layer('att_layer_2').output)
eval_metrics = OrderedDict()
for mobj in config['metrics']:
mobj = mobj.lower()
if '@' in mobj:
mt_key, mt_val = mobj.split('@', 1)
eval_metrics[mobj] = metrics.get(mt_key)(int(mt_val))
else:
eval_metrics[mobj] = metrics.get(mobj)
res = dict([[k, 0.] for k in eval_metrics.keys()])
# 这是为了打印query和sent的attention score
for tag, generator in predict_gen.items():
genfun = generator.get_batch_generator()
print('[%s]\t[Predict] @ %s ' % (time.strftime(
'%m-%d-%Y %H:%M:%S', time.localtime(time.time())), tag),
end='')
num_valid = 0
res_scores = {}
for input_data, y_true in genfun:
y_pred1, y_pred2 = encoder.predict(input_data,
batch_size=len(y_true))
y_pred1 = _to_list(np.squeeze(y_pred1).tolist())
y_pred2 = _to_list(np.squeeze(y_pred2).tolist())
# print("y_pred", len(y_pred), len(y_pred[0]))
print(input_data)
print("sent", y_pred1)
print("query", y_pred2)
print()
for tag, generator in predict_gen.items():
genfun = generator.get_batch_generator()
print('[%s]\t[Predict] @ %s ' % (time.strftime(
'%m-%d-%Y %H:%M:%S', time.localtime(time.time())), tag),
end='')
num_valid = 0
res_scores = {}
for input_data, y_true in genfun:
y_pred = model.predict(input_data, batch_size=len(y_true))
if issubclass(type(generator),
inputs.list_generator.ListBasicGenerator):
list_counts = input_data['list_counts']
for k, eval_func in eval_metrics.items():
for lc_idx in range(len(list_counts) - 1):
pre = list_counts[lc_idx]
suf = list_counts[lc_idx + 1]
res[k] += eval_func(y_true=y_true[pre:suf],
y_pred=y_pred[pre:suf])
y_pred = np.squeeze(y_pred)
for lc_idx in range(len(list_counts) - 1):
pre = list_counts[lc_idx]
suf = list_counts[lc_idx + 1]
for p, y, t in zip(input_data['ID'][pre:suf],
y_pred[pre:suf], y_true[pre:suf]):
if p[0] not in res_scores:
res_scores[p[0]] = {}
res_scores[p[0]][p[1]] = (y, t)
num_valid += len(list_counts) - 1
else:
for k, eval_func in eval_metrics.items():
res[k] += eval_func(y_true=y_true, y_pred=y_pred)
for p, y, t in zip(input_data['ID'], y_pred, y_true):
if p[0] not in res_scores:
res_scores[p[0]] = {}
res_scores[p[0]][p[1]] = (y[1], t[1])
num_valid += 1
generator.reset()
if tag in output_conf:
if output_conf[tag]['save_format'] == 'TREC':
with open(output_conf[tag]['save_path'], 'w') as f:
for qid, dinfo in res_scores.items():
dinfo = sorted(dinfo.items(),
key=lambda d: d[1][0],
reverse=True)
for inum, (did, (score, gt)) in enumerate(dinfo):
f.write('%s\tQ0\t%s\t%d\t%f\t%s\t%s\n' %
(qid, did, inum, score, config['net_name'],
gt))
elif output_conf[tag]['save_format'] == 'TEXTNET':
with open(output_conf[tag]['save_path'], 'w') as f:
for qid, dinfo in res_scores.items():
dinfo = sorted(dinfo.items(),
key=lambda d: d[1][0],
reverse=True)
for inum, (did, (score, gt)) in enumerate(dinfo):
f.write('%s %s %s %s\n' % (gt, qid, did, score))
print('[Predict] results: ',
'\t'.join(['%s=%f' % (k, v / num_valid)
for k, v in res.items()]),
end='\n')
sys.stdout.flush()
def train(config):
if seed is None:
raise Exception('Seed should be set')
print('Using seed: ' + str(seed))
# read basic config
global_conf = config["global"]
learning_rate = global_conf['learning_rate']
use_existing_weights = global_conf['use_existing_weights'] if 'use_existing_weights' in global_conf else None
optimizer = Adam(lr=learning_rate)
weights_file = str(global_conf['weights_file']) + '.%d'
weights_file_web = str(global_conf['weights_file_web']) + '.%d' if 'weights_file_web' in global_conf else None
display_interval = int(global_conf['display_interval'])
num_iters = int(global_conf['num_iters'])
save_weights_iters = int(global_conf['save_weights_iters'])
# read input config
input_conf = config['inputs']
share_input_conf = input_conf['share']
# collect embedding
if 'embed_path' in share_input_conf:
embed_dict = read_embedding(filename=share_input_conf['embed_path'])
_PAD_ = share_input_conf['vocab_size'] - 1
embed_dict[_PAD_] = np.zeros((share_input_conf['embed_size'], ), dtype=np.float32)
embed = np.float32(np.random.uniform(-0.2, 0.2, [share_input_conf['vocab_size'], share_input_conf['embed_size']]))
share_input_conf['embed'] = convert_embed_2_numpy(embed_dict, embed = embed)
else:
embed = np.float32(np.random.uniform(-0.2, 0.2, [share_input_conf['vocab_size'], share_input_conf['embed_size']]))
share_input_conf['embed'] = embed
print '[Embedding] Embedding Load Done.'
# list all input tags and construct tags config
input_train_conf = OrderedDict()
input_eval_conf = OrderedDict()
for tag in input_conf.keys():
if 'phase' not in input_conf[tag]:
continue
if input_conf[tag]['phase'] == 'TRAIN':
input_train_conf[tag] = {}
input_train_conf[tag].update(share_input_conf)
input_train_conf[tag].update(input_conf[tag])
elif input_conf[tag]['phase'] == 'EVAL':
input_eval_conf[tag] = {}
input_eval_conf[tag].update(share_input_conf)
input_eval_conf[tag].update(input_conf[tag])
# collect dataset identification
dataset = {}
for tag in input_conf:
if tag != 'share' and input_conf[tag]['phase'] == 'PREDICT':
continue
if 'text1_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text1_corpus']
if datapath not in dataset:
dataset[datapath] = read_data_2d(datapath)
if 'text2_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text2_corpus']
if datapath not in dataset:
dataset[datapath] = read_data_2d(datapath)
if 'qa_comat_file' in input_conf[tag]: # qa_comat_file for qa_cooccur_matrix in DMN_KD
datapath = input_conf[tag]['qa_comat_file']
if datapath not in dataset:
dataset[datapath] = read_qa_comat(datapath)
print '[Dataset] %s Dataset Load Done.' % len(dataset)
# initial data generator
train_gen = OrderedDict()
eval_gen = OrderedDict()
for tag, conf in input_train_conf.items():
print conf
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
if 'qa_comat_file' in share_input_conf:
conf['qa_comat'] = dataset[conf['qa_comat_file']]
generator = inputs.get(conf['input_type'])
train_gen[tag] = generator(config=conf)
for tag, conf in input_eval_conf.items():
print conf
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
if 'qa_comat_file' in share_input_conf:
conf['qa_comat'] = dataset[conf['qa_comat_file']]
generator = inputs.get(conf['input_type'])
eval_gen[tag] = generator(config=conf)
######### Load Model #########
if config['net_name'] == 'DMN_CNN_MTL':
model, model_clf = load_model(config)
if use_existing_weights:
weights_file_to_load = str(global_conf['weights_file']) + '.' + str(
global_conf['weights_to_load']) + '-' + str(seed)
model.load_weights(weights_file_to_load)
model_clf.compile(optimizer=optimizer, loss=custom_loss)
print '[Model] MTL models Compile Done.'
elif config['net_name'] == 'DMN_CNN_INTENTS':
model_clf = load_model(config)
model_clf.compile(optimizer=optimizer, loss=custom_loss)
print '[Model] Intent Only classifier model Compile Done.'
elif config['net_name'] == 'DMN_CNN_MTL_Web' or config['net_name'] == 'DMN_CNN_MTL_Web_v2':
model, model_web = load_model(config)
if use_existing_weights:
weights_file_to_load = str(global_conf['weights_file']) + '.' + str(
global_conf['weights_to_load']) + '-' + str(seed)
model.load_weights(weights_file_to_load)
weights_file_web = str(global_conf['weights_file_web']) + '.' + str(
global_conf['weights_to_load']) + '-' + str(seed)
model_web.load_weights(weights_file_web)
elif config['net_name'] == 'DMN_CNN_MTL_All':
model, model_web, model_clf = load_model(config)
model_clf.compile(optimizer=optimizer, loss=custom_loss)
else:
model = load_model(config)
if use_existing_weights:
weights_file_to_load = str(global_conf['weights_file']) + '.' + str(
global_conf['test_weights_iters']) + '-' + str(seed)
model.load_weights(weights_file_to_load)
print '[Model] Response Ranking model Compile Done.'
eval_metrics = OrderedDict()
for mobj in config['metrics']:
mobj = mobj.lower()
if '@' in mobj:
mt_key, mt_val = mobj.split('@', 1)
eval_metrics[mobj] = metrics.get(mt_key)(int(mt_val))
else:
eval_metrics[mobj] = metrics.get(mobj)
if config['net_name'] != 'DMN_CNN_INTENTS':
loss = []
for lobj in config['losses']:
if lobj['object_name'] in mz_specialized_losses:
loss.append(rank_losses.get(lobj['object_name'])(lobj['object_params']))
else:
loss.append(rank_losses.get(lobj['object_name']))
model.compile(optimizer=optimizer, loss=loss)
print '[Model] Model Compile Done.'
if config['net_name'] == 'DMN_CNN_MTL_Web' or config['net_name'] == 'DMN_CNN_MTL_Web_v2' \
or config['net_name'] == 'DMN_CNN_MTL_All':
model_web.compile(optimizer=optimizer, loss=loss)
print('[Model Web] Model Compile Done')
if share_input_conf['predict'] == 'False':
if 'test' in eval_gen:
del eval_gen['test']
if 'valid' in eval_gen:
del eval_gen['valid']
if 'eval_predict_in' in eval_gen:
del eval_gen['eval_predict_in']
for i_e in range(num_iters):
for tag, generator in train_gen.items():
genfun = generator.get_batch_generator()
print '[%s]\t[Train:%s]' % (time.strftime('%m-%d-%Y %H:%M:%S', time.localtime(time.time())), tag),
if tag == "train_clf":
correct_model = model_clf
elif tag == 'train_web':
correct_model = model_web
elif tag == "train":
correct_model = model
history = correct_model.fit_generator(
genfun,
steps_per_epoch=display_interval, # if display_interval = 10, then there are 10 batches in 1 epoch
epochs=1,
shuffle=False,
verbose=0)
print 'Iter:%d\tloss=%.6f' % (i_e, history.history['loss'][0])
if (i_e+1) % save_weights_iters == 0:
for tag, generator in eval_gen.items():
print('Evaluating tag:' + str(tag))
genfun = generator.get_batch_generator()
print '[%s]\t[Eval:%s]' % (time.strftime('%m-%d-%Y %H:%M:%S', time.localtime(time.time())), tag),
res = dict([[k,0.] for k in eval_metrics.keys()])
num_valid = 0
if tag == "valid":
correct_model = model
elif tag == "valid_web":
correct_model = model_web
elif tag == "valid_clf":
correct_model = model_clf
for input_data, y_true in genfun:
y_pred = correct_model.predict(input_data, batch_size=len(y_true))
if issubclass(type(generator), inputs.list_generator.ListBasicGenerator):
list_counts = input_data['list_counts']
for k, eval_func in eval_metrics.items():
for lc_idx in range(len(list_counts)-1):
pre = list_counts[lc_idx]
suf = list_counts[lc_idx+1]
res[k] += eval_func(y_true = y_true[pre:suf], y_pred = y_pred[pre:suf])
num_valid += len(list_counts) - 1
else:
for k, eval_func in eval_metrics.items():
res[k] += eval_func(y_true = y_true, y_pred = y_pred)
num_valid += 1
generator.reset()
print 'Iter:%d\t%s' % (i_e, '\t'.join(['%s=%f'%(k,v/num_valid) for k, v in res.items()]))
sys.stdout.flush()
sys.stdout.flush()
weights_file_name = (weights_file % (i_e+1)) + '-' + str(seed)
if (i_e+1) % save_weights_iters == 0:
if config['net_name'] == 'DMN_CNN_MTL_Web' or config['net_name'] == 'DMN_CNN_MTL_Web_v2' \
or config['net_name'] == 'DMN_CNN_MTL_All':
weights_file_name_web = (weights_file_web % (i_e + 1)) + '-' + str(seed)
model.save_weights(weights_file_name)
model_web.save_weights(weights_file_name_web)
elif config['net_name'] != 'DMN_CNN_INTENTS':
model.save_weights(weights_file_name)
else:
model_clf.save_weights(weights_file_name)
def train(config):
print(json.dumps(config, indent=2))
# read basic config
global_conf = config["global"]
optimizer = global_conf['optimizer']
weights_file = str(global_conf['weights_file']) + '.%d'
display_interval = int(global_conf['display_interval'])
num_iters = int(global_conf['num_iters'])
save_weights_iters = int(global_conf['save_weights_iters'])
# read input config
input_conf = config['inputs']
share_input_conf = input_conf['share']
# collect embedding
if 'embed_path' in share_input_conf:
embed_dict = read_embedding(filename=share_input_conf['embed_path'])
_PAD_ = share_input_conf['vocab_size'] - 1
embed_dict[_PAD_] = np.zeros((share_input_conf['embed_size'], ),
dtype=np.float32)
embed = np.float32(
np.random.uniform(-0.2, 0.2, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = convert_embed_2_numpy(embed_dict,
embed=embed)
else:
embed = np.float32(
np.random.uniform(-0.2, 0.2, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = embed
print '[Embedding] Embedding Load Done.'
# list all input tags and construct tags config
input_train_conf = OrderedDict()
input_eval_conf = OrderedDict()
for tag in input_conf.keys():
if 'phase' not in input_conf[tag]:
continue
if input_conf[tag]['phase'] == 'TRAIN':
input_train_conf[tag] = {}
input_train_conf[tag].update(share_input_conf)
input_train_conf[tag].update(input_conf[tag])
elif input_conf[tag]['phase'] == 'EVAL':
input_eval_conf[tag] = {}
input_eval_conf[tag].update(share_input_conf)
input_eval_conf[tag].update(input_conf[tag])
print '[Input] Process Input Tags. %s in TRAIN, %s in EVAL.' % (
input_train_conf.keys(), input_eval_conf.keys())
# collect dataset identification
dataset = {}
for tag in input_conf:
if tag != 'share' and input_conf[tag]['phase'] == 'PREDICT':
continue
if 'text1_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text1_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
if 'text2_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text2_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
print '[Dataset] %s Dataset Load Done.' % len(dataset)
# initial data generator
train_gen = OrderedDict()
eval_gen = OrderedDict()
for tag, conf in input_train_conf.items():
print conf
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
train_gen[tag] = generator(config=conf)
for tag, conf in input_eval_conf.items():
print conf
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
eval_gen[tag] = generator(config=conf)
######### Load Model #########
model = load_model(config)
loss = []
for lobj in config['losses']:
if lobj['object_name'] in mz_specialized_losses:
loss.append(
rank_losses.get(lobj['object_name'])(lobj['object_params']))
else:
loss.append(rank_losses.get(lobj['object_name']))
eval_metrics = OrderedDict()
for mobj in config['metrics']:
mobj = mobj.lower()
if '@' in mobj:
mt_key, mt_val = mobj.split('@', 1)
eval_metrics[mobj] = metrics.get(mt_key)(int(mt_val))
else:
eval_metrics[mobj] = metrics.get(mobj)
model.compile(optimizer=optimizer, loss=loss)
print '[Model] Model Compile Done.'
for i_e in range(num_iters):
for tag, generator in train_gen.items():
genfun = generator.get_batch_generator()
print '[%s]\t[Train:%s]' % (time.strftime(
'%m-%d-%Y %H:%M:%S', time.localtime(time.time())), tag),
history = model.fit_generator(genfun,
steps_per_epoch=display_interval,
epochs=1,
shuffle=False,
verbose=0) #callbacks=[eval_map])
print 'Iter:%d\tloss=%.6f' % (i_e, history.history['loss'][0])
for tag, generator in eval_gen.items():
genfun = generator.get_batch_generator()
print '[%s]\t[Eval:%s]' % (time.strftime(
'%m-%d-%Y %H:%M:%S', time.localtime(time.time())), tag),
res = dict([[k, 0.] for k in eval_metrics.keys()])
num_valid = 0
for input_data, y_true in genfun:
y_pred = model.predict(input_data, batch_size=len(y_true))
if issubclass(type(generator),
inputs.list_generator.ListBasicGenerator):
list_counts = input_data['list_counts']
for k, eval_func in eval_metrics.items():
for lc_idx in range(len(list_counts) - 1):
pre = list_counts[lc_idx]
suf = list_counts[lc_idx + 1]
res[k] += eval_func(y_true=y_true[pre:suf],
y_pred=y_pred[pre:suf])
num_valid += len(list_counts) - 1
else:
for k, eval_func in eval_metrics.items():
res[k] += eval_func(y_true=y_true, y_pred=y_pred)
num_valid += 1
generator.reset()
print 'Iter:%d\t%s' % (i_e, '\t'.join(
['%s=%f' % (k, v / num_valid) for k, v in res.items()]))
sys.stdout.flush()
if (i_e + 1) % save_weights_iters == 0:
model.save_weights(weights_file % (i_e + 1))
def predict(config):
print(json.dumps(config, indent=2))
# read basic config
global_conf = config["global"]
optimizer = global_conf['optimizer']
# read input config
input_conf = config['inputs']
share_input_conf = input_conf['share']
# collect embedding
assert 'embed_path' in share_input_conf
embed_dict, vocab_size, embed_size, word_dict, idf_dict = read_embedding(
share_input_conf['embed_path'])
share_input_conf['word_dict'] = word_dict
share_input_conf['vocab_size'] = vocab_size
share_input_conf['embed_size'] = embed_size
embed = np.float32(np.random.uniform(-9, 9, [vocab_size, embed_size]))
embed_normalize = False
if 'drmm' in config['model']['model_py'].lower():
embed_normalize = True
share_input_conf['embed'] = convert_embed_2_numpy(
'embed', embed_dict=embed_dict, embed=embed, normalize=embed_normalize)
idf = np.float32(np.random.uniform(4, 9, [vocab_size, 1]))
share_input_conf['idf_feat'] = convert_embed_2_numpy('idf',
embed_dict=idf_dict,
embed=idf,
normalize=False)
print '[%s]' % time.strftime(
"%Y-%m-%d %H:%M:%S",
time.localtime()), '[Embedding] Embedding Load Done.'
# list all input tags and construct tags config
input_eval_conf = OrderedDict()
for tag in input_conf.keys():
if 'phase' not in input_conf[tag]:
continue
if input_conf[tag]['phase'] == 'TRAIN':
continue
elif input_conf[tag]['phase'] == 'EVAL':
input_eval_conf[tag] = {}
input_eval_conf[tag].update(share_input_conf)
input_eval_conf[tag].update(input_conf[tag])
print '[%s]' % time.strftime("%Y-%m-%d %H:%M:%S", time.localtime()),
print '[Input] Process Input Tags. %s in EVAL.' % (input_eval_conf.keys())
# initial data generator
eval_gen = OrderedDict()
for tag, conf in input_eval_conf.items():
generator = inputs.get(conf['input_type'])
eval_gen[tag] = generator(config=conf)
######### Load Model #########
_model = load_model(config)
# model = multi_gpu_model(_model, gpus=2)
model = _model
if 'load_weights_path' in global_conf:
model.load_weights(global_conf['load_weights_path'])
else:
print 'no load_weights_path'
exit(0)
loss = []
for lobj in config['losses']:
loss.append(rank_losses.get(lobj))
eval_metrics = OrderedDict()
for mobj in config['metrics']:
mobj = mobj.lower()
if '@' in mobj:
mt_key, mt_val = mobj.split('@', 1)
eval_metrics[mobj] = metrics.get(mt_key)(int(mt_val))
else:
eval_metrics[mobj] = metrics.get(mobj)
model.compile(optimizer=optimizer, loss=loss)
print '[%s]' % time.strftime(
"%Y-%m-%d %H:%M:%S", time.localtime()), '[Model] Model Compile Done.\n'
print '\n### Model Info ###'
model.summary()
print '### Model Info ###\n'
for i_e in range(1):
for tag, generator in eval_gen.items():
output_dir = config['net_name'].split('_')[0]
output = open(
'../output/%s/%s_%s_predict_output_%s.txt' %
(output_dir, config['net_name'], tag, str(i_e + 1)), 'w')
qid_uid_rel_score = {}
qid_uid_score = {}
genfun = generator.get_batch_generator()
for input_data, y_true, curr_batch in genfun:
y_pred = model.predict(input_data, batch_size=len(y_true))
y_pred_reshape = np.reshape(y_pred, (len(y_pred), ))
# output the predict scores
for (q, d, label), score in zip(curr_batch, y_pred_reshape):
output.write('%s\t%s\t%s\t%s\n' %
(str(q), str(d), str(label), str(score)))
if q not in qid_uid_score:
qid_uid_score[q] = {}
qid_uid_score[q][d] = score
if q not in qid_uid_rel_score:
qid_uid_rel_score[q] = dict(label=list(), score=list())
qid_uid_rel_score[q]['label'].append(label)
qid_uid_rel_score[q]['score'].append(score)
output.close()
# calculate the metrices
res = dict([[k, 0.] for k in eval_metrics.keys()])
for k, eval_func in eval_metrics.items():
for qid in qid_uid_rel_score:
res[k] += eval_func(y_true=qid_uid_rel_score[qid]['label'],
y_pred=qid_uid_rel_score[qid]['score'])
res[k] /= len(qid_uid_rel_score)
if 'test' in tag:
print '[%s]' % time.strftime("%Y-%m-%d %H:%M:%S",
time.localtime()),
print '[Eval] @ epoch: %d,' % (i_e + 1),
print ', '.join(['%s: %.5f' % (k, res[k]) for k in res])
else:
# calculate the eval_loss
all_pairs = generator.get_all_pairs()
all_pairs_rel_score = {}
for qid, dp_id, dn_id in all_pairs:
all_pairs_rel_score[(qid, dp_id, dn_id)] = {}
all_pairs_rel_score[(qid, dp_id, dn_id)]['score'] = [
qid_uid_score[qid][dp_id], qid_uid_score[qid][dn_id]
]
all_pairs_rel_score[(qid, dp_id,
dn_id)]['rel'] = all_pairs[(qid,
dp_id,
dn_id)]
eval_loss = cal_eval_loss(all_pairs_rel_score, tag,
config['losses'])
print '[%s]' % time.strftime("%Y-%m-%d %H:%M:%S",
time.localtime()),
print '[Eval] @ epoch: %d,' % (i_e + 1),
print ', '.join(
['%s: %.5f' % (k, eval_loss[k]) for k in eval_loss]),
print ', '.join(['%s: %.5f' % (k, res[k]) for k in res])
print ''
def predict(config):
######## Read input config ########
print(json.dumps(config, indent=2), end='\n')
input_conf = config['inputs']
share_input_conf = input_conf['share']
# collect embedding
if 'embed_path' in share_input_conf:
embed_dict = read_embedding(filename=share_input_conf['embed_path'])
_PAD_ = share_input_conf['vocab_size'] - 1
embed_dict[_PAD_] = np.zeros((share_input_conf['embed_size'], ),
dtype=np.float32)
embed = np.float32(
np.random.uniform(-0.02, 0.02, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = convert_embed_2_numpy(embed_dict,
embed=embed)
else:
embed = np.float32(
np.random.uniform(-0.2, 0.2, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = embed
print('[Embedding] Embedding Load Done.', end='\n')
# list all input tags and construct tags config
input_predict_conf = OrderedDict()
for tag in input_conf.keys():
if 'phase' not in input_conf[tag]:
continue
if input_conf[tag]['phase'] == 'PREDICT':
input_predict_conf[tag] = {}
input_predict_conf[tag].update(share_input_conf)
input_predict_conf[tag].update(input_conf[tag])
print('[Input] Process Input Tags. %s in PREDICT.' %
(input_predict_conf.keys()),
end='\n')
# collect dataset identification
dataset = {}
for tag in input_conf:
if tag == 'share' or input_conf[tag]['phase'] == 'PREDICT':
if 'text1_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text1_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
if 'text2_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text2_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
print('[Dataset] %s Dataset Load Done.' % len(dataset), end='\n')
# initial data generator
predict_gen = OrderedDict()
for tag, conf in input_predict_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
predict_gen[tag] = generator(
#data1 = dataset[conf['text1_corpus']],
#data2 = dataset[conf['text2_corpus']],
config=conf)
######## Read output config ########
output_conf = config['outputs']
######## Load Model ########
global_conf = config["global"]
weights_file = str(global_conf['weights_file']) + '.' + str(
global_conf['test_weights_iters'])
zmodel, kmodel = load_model(config)
# test y_pred from zoo model and keras model
# keras2_y_pred = kmodel.predict(input_data, batch_size=batch_size)
# y_pred = model.forward(input_data)
# # y_pred = model.predict(input_data, distributed=False)
# equal = np.allclose(y_pred, keras2_y_pred, rtol=1e-5, atol=1e-5)
# print(equal)
# return y_pred
eval_metrics = OrderedDict()
for mobj in config['metrics']:
mobj = mobj.lower()
if '@' in mobj:
mt_key, mt_val = mobj.split('@', 1)
eval_metrics[mobj] = metrics.get(mt_key)(int(mt_val))
else:
eval_metrics[mobj] = metrics.get(mobj)
res = dict([[k, 0.] for k in eval_metrics.keys()])
# batch_size = 20
# query_data = np.random.randint(0, 10000, [batch_size, 10])
# doc_data = np.random.randint(0, 10000, [batch_size, 40])
# input_data = [query_data, doc_data]
# keras2_y_pred = keras2_model.predict(input_data, batch_size=batch_size)
# y_pred = model.predict(input_data, distributed=False)
# equal = np.allclose(y_pred, keras2_y_pred, rtol=1e-5, atol=1e-5)
for tag, generator in predict_gen.items():
genfun = generator.get_batch_generator()
print('[%s]\t[Predict] @ %s ' % (time.strftime(
'%m-%d-%Y %H:%M:%S', time.localtime(time.time())), tag),
end='')
num_valid = 0
res_scores = {}
for input_data, y_true in genfun:
ky_pred = kmodel.predict(input_data, batch_size=len(y_true))
names = ['query', 'doc']
shapes = [(None, 10), (None, 40)]
list_input_data = _standardize_input_data(input_data,
names,
shapes,
check_batch_axis=False)
# list_input_data = [data[0:2, :] for data in list_input_data]
# y_pred = zmodel.predict(list_input_data, distributed=False)
y_pred = zmodel.forward(list_input_data)
equal = np.allclose(y_pred, ky_pred, rtol=1e-5, atol=1e-5)
print(equal)
if issubclass(type(generator),
inputs.list_generator.ListBasicGenerator):
list_counts = input_data['list_counts']
for k, eval_func in eval_metrics.items():
for lc_idx in range(len(list_counts) - 1):
pre = list_counts[lc_idx]
suf = list_counts[lc_idx + 1]
res[k] += eval_func(y_true=y_true[pre:suf],
y_pred=y_pred[pre:suf])
y_pred = np.squeeze(y_pred)
for lc_idx in range(len(list_counts) - 1):
pre = list_counts[lc_idx]
suf = list_counts[lc_idx + 1]
for p, y, t in zip(input_data['ID'][pre:suf],
y_pred[pre:suf], y_true[pre:suf]):
if p[0] not in res_scores:
res_scores[p[0]] = {}
res_scores[p[0]][p[1]] = (y, t)
num_valid += len(list_counts) - 1
else:
for k, eval_func in eval_metrics.items():
res[k] += eval_func(y_true=y_true, y_pred=y_pred)
for p, y, t in zip(input_data['ID'], y_pred, y_true):
if p[0] not in res_scores:
res_scores[p[0]] = {}
res_scores[p[0]][p[1]] = (y[1], t[1])
num_valid += 1
generator.reset()
if tag in output_conf:
if output_conf[tag]['save_format'] == 'TREC':
with open(output_conf[tag]['save_path'], 'w') as f:
for qid, dinfo in res_scores.items():
dinfo = sorted(dinfo.items(),
key=lambda d: d[1][0],
reverse=True)
for inum, (did, (score, gt)) in enumerate(dinfo):
f.write('%s\tQ0\t%s\t%d\t%f\t%s\t%s\n' %
(qid, did, inum, score, config['net_name'],
gt))
elif output_conf[tag]['save_format'] == 'TEXTNET':
with open(output_conf[tag]['save_path'], 'w') as f:
for qid, dinfo in res_scores.items():
dinfo = sorted(dinfo.items(),
key=lambda d: d[1][0],
reverse=True)
for inum, (did, (score, gt)) in enumerate(dinfo):
f.write('%s %s %s %s\n' % (gt, qid, did, score))
print('[Predict] results: ',
'\t'.join(['%s=%f' % (k, v / num_valid)
for k, v in res.items()]),
end='\n')
sys.stdout.flush()
def train(config):
print(json.dumps(config, indent=2), end='\n')
# read basic config
global_conf = config["global"]
optimizer = global_conf['optimizer']
optimizer = optimizers.get(optimizer)
K.set_value(optimizer.lr, global_conf['learning_rate'])
weights_file = str(global_conf['weights_file']) + '.%d'
global logs_dir
logs_dir = str(global_conf['logs'])
if not os.path.exists(logs_dir):
os.makedirs(logs_dir)
display_interval = int(global_conf['display_interval'])
num_iters = int(global_conf['num_iters'])
save_weights_iters = int(global_conf['save_weights_iters'])
# read input config
input_conf = config['inputs']
share_input_conf = input_conf['share']
# collect embedding
if 'embed_path' in share_input_conf:
embed_dict = read_embedding(filename=share_input_conf['embed_path'])
_PAD_ = share_input_conf['vocab_size'] - 1
embed_dict[_PAD_] = np.zeros((share_input_conf['embed_size'], ),
dtype=np.float32)
embed = np.float32(
np.random.uniform(-0.2, 0.2, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = convert_embed_2_numpy(embed_dict,
embed=embed)
else:
embed = np.float32(
np.random.uniform(-0.2, 0.2, [
share_input_conf['vocab_size'], share_input_conf['embed_size']
]))
share_input_conf['embed'] = embed
print('[Embedding] Embedding Load Done.', end='\n')
# list all input tags and construct tags config
input_train_conf = OrderedDict()
input_eval_conf = OrderedDict()
input_eval_loss_conf = OrderedDict()
for tag in input_conf.keys():
if 'phase' not in input_conf[tag]:
continue
if input_conf[tag]['phase'] == 'TRAIN':
input_train_conf[tag] = {}
input_train_conf[tag].update(share_input_conf)
input_train_conf[tag].update(input_conf[tag])
stats_for_plots[tag + '_loss'] = dict()
elif input_conf[tag]['phase'] == 'EVAL':
input_eval_conf[tag] = {}
input_eval_conf[tag].update(share_input_conf)
input_eval_conf[tag].update(input_conf[tag])
stats_for_plots[tag] = dict()
elif input_conf[tag]['phase'] == 'EVAL_LOSS':
input_eval_loss_conf[tag] = {}
input_eval_loss_conf[tag].update(share_input_conf)
input_eval_loss_conf[tag].update(input_conf[tag])
stats_for_plots[tag] = dict()
print(
'[Input] Process Input Tags. %s in TRAIN, %s in EVAL, %s in EVAL_LOSS.'
% (input_train_conf.keys(), input_eval_conf.keys(),
input_eval_loss_conf.keys()),
end='\n')
# collect dataset identification
dataset = {}
for tag in input_conf:
if tag != 'share' and input_conf[tag]['phase'] == 'PREDICT':
continue
if 'text1_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text1_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
if 'text2_corpus' in input_conf[tag]:
datapath = input_conf[tag]['text2_corpus']
if datapath not in dataset:
dataset[datapath], _ = read_data(datapath)
print('[Dataset] %s Dataset Load Done.' % len(dataset), end='\n')
# initial data generator
train_gen = OrderedDict()
eval_gen = OrderedDict()
eval_loss_gen = OrderedDict()
for tag, conf in input_train_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
train_gen[tag] = generator(config=conf)
for tag, conf in input_eval_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
eval_gen[tag] = generator(config=conf)
for tag, conf in input_eval_loss_conf.items():
print(conf, end='\n')
conf['data1'] = dataset[conf['text1_corpus']]
conf['data2'] = dataset[conf['text2_corpus']]
generator = inputs.get(conf['input_type'])
eval_loss_gen[tag] = generator(config=conf)
######### Load Model #########
model = load_model(config)
loss = []
for lobj in config['losses']:
if lobj['object_name'] in mz_specialized_losses:
loss.append(
rank_losses.get(lobj['object_name'])(lobj['object_params']))
else:
loss.append(rank_losses.get(lobj['object_name']))
for k, v in stats_for_plots.items():
if 'loss' in k:
stats_for_plots[k][lobj['object_name']] = []
eval_metrics = OrderedDict()
for mobj in config['metrics']:
mobj = mobj.lower()
if '@' in mobj:
mt_key, mt_val = mobj.split('@', 1)
eval_metrics[mobj] = metrics.get(mt_key)(int(mt_val))
else:
eval_metrics[mobj] = metrics.get(mobj)
for k, v in stats_for_plots.items():
if 'loss' not in k:
stats_for_plots[k][mobj] = []
model.compile(optimizer=optimizer, loss=loss)
print('[Model] Model Compile Done.', end='\n')
for i_e in range(num_iters):
for tag, generator in train_gen.items():
genfun = generator.get_batch_generator()
evalfun = eval_loss_gen['test_loss'].get_batch_generator()
print('*' * 100)
history = model.fit_generator(
genfun,
steps_per_epoch=display_interval,
epochs=1,
shuffle=False,
verbose=0,
validation_data=evalfun,
validation_steps=display_interval,
callbacks=[
TrainValTensorBoard(log_dir=os.path.join(
logs_dir, 'tensorboard'),
global_step=display_interval * i_e,
write_graph=False)
]) #callbacks=[eval_map])
for k, v in stats_for_plots.items():
if 'loss' in k:
print('[%s]\t[Train:%s] ' % (time.strftime(
'%m-%d-%Y %H:%M:%S', time.localtime(time.time())), k),
end='')
if any(srchstr in k
for srchstr in ('test', 'val', 'valid')):
_l = history.history['val_loss'][0]
stats_for_plots[k][lobj['object_name']].append(_l)
else:
_l = history.history['loss'][0]
stats_for_plots[k][lobj['object_name']].append(_l)
print('Iter:%d\t Loss =%.6f' % (i_e, _l), end='\n')
print('-' * 50)
for tag, generator in eval_gen.items():
genfun = generator.get_batch_generator()
print('[%s]\t[Eval:%s] ' % (time.strftime(
'%m-%d-%Y %H:%M:%S', time.localtime(time.time())), tag),
end='')
res = dict([[k, 0.] for k in eval_metrics.keys()])
num_valid = 0
#history_eval = model.evaluate_generator(genfun, steps=1)
#print("history_eval: {}".format(history_eval))
for input_data, y_true in genfun:
y_pred = model.predict(input_data, batch_size=len(y_true))
if issubclass(type(generator),
inputs.list_generator.ListBasicGenerator):
list_counts = input_data['list_counts']
for k, eval_func in eval_metrics.items():
for lc_idx in range(len(list_counts) - 1):
pre = list_counts[lc_idx]
suf = list_counts[lc_idx + 1]
res[k] += eval_func(y_true=y_true[pre:suf],
y_pred=y_pred[pre:suf])
num_valid += len(list_counts) - 1
else:
for k, eval_func in eval_metrics.items():
res[k] += eval_func(y_true=y_true, y_pred=y_pred)
num_valid += 1
generator.reset()
for k, v in res.items():
stats_for_plots[tag][k].append(v / num_valid)
print('Iter:%d\t%s' % (i_e, '\t'.join(
['%s=%f' % (k, v / num_valid) for k, v in res.items()])),
end='\n')
sys.stdout.flush()
if (i_e + 1) % save_weights_iters == 0:
model.save_weights(weights_file % (i_e + 1))
export_loss(False, 1)
export_metrics(False, 1)
