def test_match_reference_doesnt_touch_curated(isolated_app):
cited_record_json = {
'$schema': 'http://localhost:5000/schemas/records/hep.json',
'_collections': ['Literature'],
'control_number': 1,
'document_type': ['article'],
'dois': [{
'value': '10.1371/journal.pone.0188398',
}],
}
TestRecordMetadata.create_from_kwargs(
json=cited_record_json, index_name='records-hep')
reference = {
'curated_relation': True,
'record': {
'$ref': 'http://localhost:5000/api/literature/42',
},
'reference': {
'dois': ['10.1371/journal.pone.0188398'],
}
}
schema = load_schema('hep')
subschema = schema['properties']['references']
assert validate([reference], subschema) is None
reference = match_reference(reference)
assert reference['record']['$ref'] == 'http://localhost:5000/api/literature/42'
def test_match_reference_for_data_config(isolated_app):
"""Test reference matcher for the JCAP and JHEP configuration"""
cited_record_json = {
'$schema': 'http://localhost:5000/schemas/records/data.json',
'_collections': ['Data'],
'control_number': 1,
'dois': [
{
'value': '10.5281/zenodo.11020'
}
],
}
TestRecordMetadata.create_from_kwargs(
json=cited_record_json, index_name='records-data', pid_type='dat')
reference = {
'reference': {
'dois': [
'10.5281/zenodo.11020'
],
'publication_info': {
'year': 2007
}
}
}
reference = match_reference(reference)
assert reference['record']['$ref'] == 'http://localhost:5000/api/data/1'
def test_match_reference_ignores_hidden_collections(isolated_app):
cited_record_json = {
'$schema': 'http://localhost:5000/schemas/records/hep.json',
'_collections': ['HAL Hidden'],
'control_number': 1,
'document_type': ['article'],
'dois': [{
'value': '10.1371/journal.pone.0188398',
}],
}
TestRecordMetadata.create_from_kwargs(
json=cited_record_json, index_name='records-hep')
reference = {
'reference': {
'dois': ['10.1371/journal.pone.0188398'],
}
}
schema = load_schema('hep')
subschema = schema['properties']['references']
assert validate([reference], subschema) is None
reference = match_reference(reference)
assert 'record' not in reference
def test_match_reference_for_data_config(isolated_app):
"""Test reference matcher for the JCAP and JHEP configuration"""
cited_record_json = {
'$schema': 'http://localhost:5000/schemas/records/data.json',
'_collections': ['Data'],
'control_number': 1,
'dois': [{
'value': '10.5281/zenodo.11020'
}],
}
TestRecordMetadata.create_from_kwargs(json=cited_record_json,
index_name='records-data',
pid_type='dat')
reference = {
'reference': {
'dois': ['10.5281/zenodo.11020'],
'publication_info': {
'year': 2007
}
}
}
reference = match_reference(reference)
assert reference['record']['$ref'] == 'http://localhost:5000/api/data/1'
def test_match_reference_on_texkey(isolated_app):
cited_record_json = {
'$schema': 'http://localhost:5000/schemas/records/hep.json',
'_collections': ['Literature'],
'control_number': 1,
'document_type': ['article'],
'texkeys': [
'Giudice:2007fh',
],
'titles': [
{
'title': 'The Strongly-Interacting Light Higgs'
}
],
}
TestRecordMetadata.create_from_kwargs(
json=cited_record_json, index_name='records-hep')
reference = {
'reference': {
'texkey': 'Giudice:2007fh',
}
}
schema = load_schema('hep')
subschema = schema['properties']['references']
assert validate([reference], subschema) is None
reference = match_reference(reference)
assert reference['record']['$ref'] == 'http://localhost:5000/api/literature/1'
assert validate([reference], subschema) is None
def test_match_reference_doesnt_touch_curated(isolated_app):
cited_record_json = {
'$schema': 'http://localhost:5000/schemas/records/hep.json',
'_collections': ['Literature'],
'control_number': 1,
'document_type': ['article'],
'dois': [{
'value': '10.1371/journal.pone.0188398',
}],
}
TestRecordMetadata.create_from_kwargs(json=cited_record_json,
index_name='records-hep')
reference = {
'curated_relation': True,
'record': {
'$ref': 'http://localhost:5000/api/literature/42',
},
'reference': {
'dois': ['10.1371/journal.pone.0188398'],
}
}
schema = load_schema('hep')
subschema = schema['properties']['references']
assert validate([reference], subschema) is None
reference = match_reference(reference)
assert reference['record'][
'$ref'] == 'http://localhost:5000/api/literature/42'
def test_match_reference_ignores_hidden_collections(isolated_app):
cited_record_json = {
'$schema': 'http://localhost:5000/schemas/records/hep.json',
'_collections': ['HAL Hidden'],
'control_number': 1,
'document_type': ['article'],
'dois': [{
'value': '10.1371/journal.pone.0188398',
}],
}
TestRecordMetadata.create_from_kwargs(json=cited_record_json,
index_name='records-hep')
reference = {
'reference': {
'dois': ['10.1371/journal.pone.0188398'],
}
}
schema = load_schema('hep')
subschema = schema['properties']['references']
assert validate([reference], subschema) is None
reference = match_reference(reference)
assert 'record' not in reference
def test_match_reference_on_texkey(isolated_app):
cited_record_json = {
'$schema': 'http://localhost:5000/schemas/records/hep.json',
'_collections': ['Literature'],
'control_number': 1,
'document_type': ['article'],
'texkeys': [
'Giudice:2007fh',
],
'titles': [{
'title': 'The Strongly-Interacting Light Higgs'
}],
}
TestRecordMetadata.create_from_kwargs(json=cited_record_json,
index_name='records-hep')
reference = {
'reference': {
'texkey': 'Giudice:2007fh',
}
}
schema = load_schema('hep')
subschema = schema['properties']['references']
assert validate([reference], subschema) is None
reference = match_reference(reference)
assert reference['record'][
'$ref'] == 'http://localhost:5000/api/literature/1'
assert validate([reference], subschema) is None
def test_match_reference_for_jcap_and_jhep_config(isolated_app):
"""Test reference matcher for the JCAP and JHEP configuration"""
cited_record_json = {
'$schema': 'http://localhost:5000/schemas/records/hep.json',
'_collections': ['Literature'],
'control_number': 1,
'document_type': ['article'],
'publication_info': [
{
'artid': '045',
'journal_title': 'JHEP',
'journal_volume': '06',
'page_start': '045',
'year': 2007
}
],
'titles': [
{
'title': 'The Strongly-Interacting Light Higgs'
}
],
}
TestRecordMetadata.create_from_kwargs(
json=cited_record_json, index_name='records-hep')
reference = {
'reference': {
'publication_info': {
'artid': '045',
'journal_title': 'JHEP',
'journal_volume': '06',
'page_start': '045',
'year': 2007
}
}
}
schema = load_schema('hep')
subschema = schema['properties']['references']
assert validate([reference], subschema) is None
reference = match_reference(reference)
assert reference['record']['$ref'] == 'http://localhost:5000/api/literature/1'
assert validate([reference], subschema) is None
def test_match_reference_for_jcap_and_jhep_config(isolated_app):
"""Test reference matcher for the JCAP and JHEP configuration"""
cited_record_json = {
'$schema': 'http://localhost:5000/schemas/records/hep.json',
'_collections': ['Literature'],
'control_number': 1,
'document_type': ['article'],
'publication_info': [
{
'artid': '045',
'journal_title': 'JHEP',
'journal_volume': '06',
'page_start': '045',
'year': 2007
}
],
'titles': [
{
'title': 'The Strongly-Interacting Light Higgs'
}
],
}
TestRecordMetadata.create_from_kwargs(
json=cited_record_json, index_name='records-hep')
reference = {
'reference': {
'publication_info': {
'artid': '045',
'journal_title': 'JHEP',
'journal_volume': '06',
'page_start': '045',
'year': 2007
}
}
}
schema = load_schema('hep')
subschema = schema['properties']['references']
assert validate([reference], subschema) is None
reference = match_reference(reference)
assert reference['record']['$ref'] == 'http://localhost:5000/api/literature/1'
assert validate([reference], subschema) is None
def test_match_reference_on_texkey_has_lower_priority_than_pub_info(isolated_app):
cited_record_with_texkey_json = {
'$schema': 'http://localhost:5000/schemas/records/hep.json',
'_collections': ['Literature'],
'control_number': 1,
'document_type': ['article'],
'texkeys': [
'MyTexKey:2008fh',
],
'titles': [
{
'title': 'The Strongly-Interacting Light Higgs'
}
],
}
TestRecordMetadata.create_from_kwargs(
json=cited_record_with_texkey_json, index_name='records-hep')
cited_record_with_pub_info_json = {
'$schema': 'http://localhost:5000/schemas/records/hep.json',
'_collections': ['Literature'],
'control_number': 2,
'document_type': ['article'],
'publication_info': [
{
'artid': '100',
'journal_title': 'JHEP',
'journal_volume': '100',
'page_start': '100',
'year': 2020
}
],
'titles': [
{
'title': 'The Strongly-Interacting Light Higgs'
}
],
}
TestRecordMetadata.create_from_kwargs(
json=cited_record_with_pub_info_json, index_name='records-hep')
reference = {
'reference': {
'texkey': 'MyTexKey:2008fh',
'publication_info': {
'artid': '100',
'journal_title': 'JHEP',
'journal_volume': '100',
'page_start': '100',
'year': 2020
}
}
}
schema = load_schema('hep')
subschema = schema['properties']['references']
assert validate([reference], subschema) is None
reference = match_reference(reference)
assert reference['record']['$ref'] == 'http://localhost:5000/api/literature/2'
assert validate([reference], subschema) is None