def test_parse_obspy_objects():
filename = os.path.join(DATA, "TA.Q56A..BH.xml")
inv = obspy.read_inventory(filename)
receivers = Receiver.parse(inv)
assert len(receivers) == 1
rec = receivers[0]
assert (rec.latitude, rec.longitude, rec.network, rec.station) == (
elliptic_to_geocentric_latitude(39.041),
-79.1871,
"TA",
"Q56A",
)
receivers = Receiver.parse(inv[0])
assert len(receivers) == 1
rec = receivers[0]
assert (rec.latitude, rec.longitude, rec.network, rec.station) == (
elliptic_to_geocentric_latitude(39.041),
-79.1871,
"TA",
"Q56A",
)
receivers = Receiver.parse(inv[0][0], network_code="TA")
assert len(receivers) == 1
rec = receivers[0]
assert (rec.latitude, rec.longitude, rec.network, rec.station) == (
elliptic_to_geocentric_latitude(39.041),
-79.1871,
"TA",
"Q56A",
)
def test_equality_methods():
"""
Tests the (in)equality methods of source and receiver objects. They both
inherit from the same base class thus they are tested here - but it
would also be suitable for the receiver tests.
"""
src1 = Source(latitude=1, longitude=2)
src2 = Source(latitude=3, longitude=3)
rec1 = Receiver(latitude=1, longitude=2)
rec2 = Receiver(latitude=3, longitude=3)
assert src1 == src1
assert src2 == src2
assert rec1 == rec1
assert rec2 == rec2
assert src1 != src2
assert src1 != rec1
assert src1 != rec2
assert src2 != src1
assert src2 != rec1
assert src2 != rec2
assert rec1 != rec2
assert rec1 != src1
assert rec1 != src2
assert rec2 != src1
assert rec2 != src1
assert rec2 != src2
def test_parse_sac_file_without_coordinates():
filename = os.path.join(DATA, "example_without_coordinates.sac")
with pytest.raises(ReceiverParseError) as e:
Receiver.parse(filename)
assert "SAC file does not contain coordinates for channel".lower() in \
str(e).lower()
def test_parse_sac_file_without_coordinates():
filename = os.path.join(DATA, "example_without_coordinates.sac")
with pytest.raises(ReceiverParseError) as e:
Receiver.parse(filename)
assert "SAC file does not contain coordinates for channel".lower() in \
str(e).lower()
def test_station_x_y_z():
station = Receiver(latitude=42.6390, longitude=74.4940, depth_in_m=0.0)
assert abs(station.x() - 1252949.21995) < 1E-5
assert abs(station.y() - 4516152.38916) < 1E-5
assert abs(station.z() - 4315567.96379) < 1E-5
assert abs(station.colatitude - 47.3609999) < 1E-5
assert station.depth_in_m == 0.0
assert station.radius_in_m() == 6371000.0
def test_parse_stations_file(tmpdir):
"""
Tests parsing from a STATIONS file. tmpdir is a pytest fixture.
"""
filename = os.path.join(tmpdir.dirname, "STATIONS")
lines = (
"AAK II 10. 20. 1645.0 30.0",
"BBK AA 20. 30. 1645.0 30.0",
)
with open(filename, "wt") as fh:
fh.write("\n".join(lines))
receivers = Receiver.parse(filename)
assert len(receivers) == 2
rec = receivers[0]
assert (rec.latitude, rec.longitude, rec.network, rec.station) == (
elliptic_to_geocentric_latitude(10.0),
20.0,
"II",
"AAK",
)
rec = receivers[1]
assert (rec.latitude, rec.longitude, rec.network, rec.station) == (
elliptic_to_geocentric_latitude(20.0),
30.0,
"AA",
"BBK",
)
def test_duplicate_receivers():
"""
Many waveform files contain multiple channels of the same stations. Of
course these duplicates need to be purged.
"""
filename = os.path.join(DATA, "example.sac")
st = obspy.read(filename)
st += st.copy()
st[1].stats.channel = "LHZ"
receivers = Receiver.parse(st)
assert len(receivers) == 1
rec = receivers[0]
# Coordinates are assumed to be WGS84 and will be converted to geocentric.
assert (
round(rec.latitude, 3),
round(rec.longitude, 3),
rec.network,
rec.station,
) == (
round(elliptic_to_geocentric_latitude(34.94598), 3),
round(-106.45713, 3),
"IU",
"ANMO",
)
def test_invalid_lat_lng_values():
"""
Tests invalid latitude/longitude values
"""
Receiver(latitude=10, longitude=10)
with pytest.raises(ValueError):
Receiver(latitude=100, longitude=10)
with pytest.raises(ValueError):
Receiver(latitude=-100, longitude=10)
with pytest.raises(ValueError):
Receiver(latitude=10, longitude=200)
with pytest.raises(ValueError):
Receiver(latitude=10, longitude=-200)
def test_dataless_seed_files():
filename = os.path.join(DATA, "dataless.seed.BW_FURT")
receivers = Receiver.parse(filename)
assert len(receivers) == 1
rec = receivers[0]
assert (round(rec.latitude, 3), round(rec.longitude, 3),
rec.network, rec.station) == \
(round(48.162899, 3), round(11.2752, 3), 'BW', 'FURT')
def iterate(self):
rec = Receiver(latitude=20, longitude=20)
lat = random.random() * 0.5
lat += 44
lng = random.random() * 0.5
lng += 44
depth_in_m = random.random() * 50000
src = Source(latitude=lat, longitude=lng, depth_in_m=depth_in_m)
self.db.get_seismograms(source=src, receiver=rec)
def test_parse_StationXML():
filename = os.path.join(DATA, "TA.Q56A..BH.xml")
receivers = Receiver.parse(filename)
assert len(receivers) == 1
rec = receivers[0]
assert (rec.latitude, rec.longitude, rec.network, rec.station) == \
(elliptic_to_geocentric_latitude(39.041), -79.1871, "TA", "Q56A")
def test_parse_stationxml():
filename = os.path.join(DATA, "TA.Q56A..BH.xml")
receivers = Receiver.parse(filename)
assert len(receivers) == 1
rec = receivers[0]
assert (rec.latitude, rec.longitude, rec.network, rec.station) == \
(elliptic_to_geocentric_latitude(39.041), -79.1871, "TA", "Q56A")
def test_parse_sac_files():
filename = os.path.join(DATA, "example.sac")
receivers = Receiver.parse(filename)
assert len(receivers) == 1
rec = receivers[0]
assert (round(rec.latitude, 3), round(rec.longitude, 3),
rec.network, rec.station) == \
(round(34.94598, 3), round(-106.45713, 3), 'IU', 'ANMO')
def test_parse_StationXML():
filename = os.path.join(DATA, "TA.Q56A..BH.xml")
receivers = Receiver.parse(filename)
assert len(receivers) == 1
rec = receivers[0]
assert (rec.latitude, rec.longitude, rec.network, rec.station) == \
(39.041, -79.1871, "TA", "Q56A")
def test_parse_obspy_waveform_objects():
filename = os.path.join(DATA, "example.sac")
st = obspy.read(filename)
# From stream.
receivers = Receiver.parse(st)
assert len(receivers) == 1
rec = receivers[0]
assert (round(rec.latitude, 3), round(rec.longitude, 3),
rec.network, rec.station) == \
(round(34.94598, 3), round(-106.45713, 3), 'IU', 'ANMO')
# From trace.
receivers = Receiver.parse(st[0])
assert len(receivers) == 1
rec = receivers[0]
assert (round(rec.latitude, 3), round(rec.longitude, 3),
rec.network, rec.station) == \
(round(34.94598, 3), round(-106.45713, 3), 'IU', 'ANMO')
def test_dataless_seed_files():
filename = os.path.join(DATA, "dataless.seed.BW_FURT")
receivers = Receiver.parse(filename)
assert len(receivers) == 1
rec = receivers[0]
# Coordinates are assumed to be WGS84 and will be converted to geocentric.
assert (round(rec.latitude, 3), round(rec.longitude, 3),
rec.network, rec.station) == \
(round(elliptic_to_geocentric_latitude(48.162899), 3),
round(11.2752, 3), 'BW', 'FURT')
def test_dataless_seed_files():
filename = os.path.join(DATA, "dataless.seed.BW_FURT")
receivers = Receiver.parse(filename)
assert len(receivers) == 1
rec = receivers[0]
# Coordinates are assumed to be WGS84 and will be converted to geocentric.
assert (round(rec.latitude, 3), round(rec.longitude, 3),
rec.network, rec.station) == \
(round(elliptic_to_geocentric_latitude(48.162899), 3),
round(11.2752, 3), 'BW', 'FURT')
def test_parse_sac_files():
filename = os.path.join(DATA, "example.sac")
receivers = Receiver.parse(filename)
assert len(receivers) == 1
rec = receivers[0]
assert (round(rec.latitude, 3), round(rec.longitude, 3),
rec.network, rec.station) == \
(round(elliptic_to_geocentric_latitude(34.94598), 3),
round(-106.45713, 3), 'IU', 'ANMO')
def test_str_method_of_receiver():
"""
Tests the string method of the receiver class.
"""
rec = Receiver(latitude=1.0, longitude=2.0, network="BW", station="ALTM")
assert str(rec) == ("Instaseis Receiver:\n"
"\tLongitude : 2.0 deg\n"
"\tLatitude : 1.0 deg\n"
"\tNetwork : BW\n"
"\tStation : ALTM\n"
"\tLocation : \n")
def test_parse_obspy_objects():
filename = os.path.join(DATA, "TA.Q56A..BH.xml")
inv = obspy.read_inventory(filename)
receivers = Receiver.parse(inv)
assert len(receivers) == 1
rec = receivers[0]
assert (rec.latitude, rec.longitude, rec.network, rec.station) == \
(elliptic_to_geocentric_latitude(39.041), -79.1871, "TA", "Q56A")
receivers = Receiver.parse(inv[0])
assert len(receivers) == 1
rec = receivers[0]
assert (rec.latitude, rec.longitude, rec.network, rec.station) == \
(elliptic_to_geocentric_latitude(39.041), -79.1871, "TA", "Q56A")
receivers = Receiver.parse(inv[0][0], network_code="TA")
assert len(receivers) == 1
rec = receivers[0]
assert (rec.latitude, rec.longitude, rec.network, rec.station) == \
(elliptic_to_geocentric_latitude(39.041), -79.1871, "TA", "Q56A")
def setup(self):
self.db = open_db(self.path,
read_on_demand=False,
buffer_size_in_mb=250)
self.counter = 0
self.current_depth_counter = 0
# Depth increases in 1 km steps up to a depth of 25 km.
self.depths = range(0, 25001, 1000)
self.depth_count = len(self.depths)
# Fix Receiver
self.rec = Receiver(latitude=45.0, longitude=45.0)
def iterate(self):
# Random points on a sphere.
lat = np.rad2deg(np.arcsin(2 * random.random() - 1))
lng = random.random() * 360.0 - 180.0
rec = Receiver(latitude=lat, longitude=lng)
lat = np.rad2deg(np.arcsin(2 * random.random() - 1))
lng = random.random() * 360.0 - 180.0
depth_in_m = random.random() * self.max_depth
src = Source(latitude=lat, longitude=lng, depth_in_m=depth_in_m)
self.db.get_seismograms(source=src, receiver=rec)
def test_parse_obspy_waveform_objects():
filename = os.path.join(DATA, "example.sac")
st = obspy.read(filename)
# From stream.
receivers = Receiver.parse(st)
assert len(receivers) == 1
rec = receivers[0]
# Coordinates are assumed to be WGS84 and will be converted to geocentric.
assert (round(rec.latitude, 3), round(rec.longitude, 3),
rec.network, rec.station) == \
(round(elliptic_to_geocentric_latitude(34.94598), 3),
round(-106.45713, 3), 'IU', 'ANMO')
# From trace.
receivers = Receiver.parse(st[0])
assert len(receivers) == 1
rec = receivers[0]
assert (round(rec.latitude, 3), round(rec.longitude, 3),
rec.network, rec.station) == \
(round(elliptic_to_geocentric_latitude(34.94598), 3),
round(-106.45713, 3), 'IU', 'ANMO')
def test_parse_obspy_waveform_objects():
filename = os.path.join(DATA, "example.sac")
st = obspy.read(filename)
# From stream.
receivers = Receiver.parse(st)
assert len(receivers) == 1
rec = receivers[0]
# Coordinates are assumed to be WGS84 and will be converted to geocentric.
assert (round(rec.latitude, 3), round(rec.longitude, 3),
rec.network, rec.station) == \
(round(elliptic_to_geocentric_latitude(34.94598), 3),
round(-106.45713, 3), 'IU', 'ANMO')
# From trace.
receivers = Receiver.parse(st[0])
assert len(receivers) == 1
rec = receivers[0]
assert (round(rec.latitude, 3), round(rec.longitude, 3),
rec.network, rec.station) == \
(round(elliptic_to_geocentric_latitude(34.94598), 3),
round(-106.45713, 3), 'IU', 'ANMO')
def test_station_x_y_z():
station = Receiver(latitude=42.6390, longitude=74.4940, depth_in_m=0.0)
assert abs(station.x() - 1252949.21995) < 1E-5
assert abs(station.y() - 4516152.38916) < 1E-5
assert abs(station.z() - 4315567.96379) < 1E-5
assert abs(station.colatitude - 47.3609999) < 1E-5
assert station.depth_in_m == 0.0
assert station.radius_in_m() == 6371000.0
def on_load_stations_button_released(self):
pwd = os.getcwd()
self.stations_file = str(QtGui.QFileDialog.getOpenFileName(self, "Choose Stations File", pwd))
if not self.stations_file:
return
self.receivers = Receiver.parse(self.stations_file)
recnames = []
for _r in self.receivers:
recnames.append("%s.%s" % (_r.network, _r.station))
self.ui.stations_combo.clear()
self.ui.stations_combo.addItems(recnames)
self._plot_bg_receivers()
def test_duplicate_receivers():
"""
Many waveform files contain multiple channels of the same stations. Of
course these duplicates need to be purged.
"""
filename = os.path.join(DATA, "example.sac")
st = obspy.read(filename)
st += st.copy()
st[1].stats.channel = "LHZ"
receivers = Receiver.parse(st)
assert len(receivers) == 1
rec = receivers[0]
assert (round(rec.latitude, 3), round(rec.longitude, 3),
rec.network, rec.station) == \
(round(34.94598, 3), round(-106.45713, 3), 'IU', 'ANMO')
def on_load_stations_button_released(self):
pwd = os.getcwd()
self.stations_file = str(
QtGui.QFileDialog.getOpenFileName(self, "Choose Stations File",
pwd))
if not self.stations_file:
return
self.receivers = Receiver.parse(self.stations_file)
recnames = []
for _r in self.receivers:
recnames.append("%s.%s" % (_r.network, _r.station))
self.ui.stations_combo.clear()
self.ui.stations_combo.addItems(recnames)
self._plot_bg_receivers()
def test_parse_stations_file(tmpdir):
"""
Tests parsing from a STATIONS file. tmpdir is a pytest fixture.
"""
filename = os.path.join(tmpdir.dirname, "STATIONS")
lines = (
"AAK II 10. 20. 1645.0 30.0",
"BBK AA 20. 30. 1645.0 30.0"
)
with open(filename, "wt") as fh:
fh.write("\n".join(lines))
receivers = Receiver.parse(filename)
assert len(receivers) == 2
rec = receivers[0]
assert (rec.latitude, rec.longitude, rec.network, rec.station) == \
(elliptic_to_geocentric_latitude(10.0), 20.0, "II", "AAK")
rec = receivers[1]
assert (rec.latitude, rec.longitude, rec.network, rec.station) == \
(elliptic_to_geocentric_latitude(20.0), 30.0, "AA", "BBK")
def receiver(self):
return Receiver(
latitude=float(self.ui.receiver_latitude.value()),
longitude=float(self.ui.receiver_longitude.value()),
)
def test_error_handling_when_parsing_station_files(tmpdir):
"""
Tests error handling when parsing station files.
"""
# Differing coordinates for channels of the same station.
inv = obspy.read_inventory()
with pytest.raises(ReceiverParseError) as err:
inv[0][0][0].latitude -= 10
Receiver.parse(inv)
assert err.value.args[0] == ("The coordinates of the channels of station "
"'GR.FUR' are not identical.")
# Once again, with a file.
with io.BytesIO() as buf:
inv.write(buf, format="stationxml")
buf.seek(0)
with pytest.raises(ReceiverParseError) as err:
Receiver.parse(buf)
assert err.value.args[0] == ("The coordinates of the channels of station "
"'GR.FUR' are not identical.")
# ObsPy Trace without a sac attribute.
with pytest.raises(ReceiverParseError) as err:
Receiver.parse(obspy.read())
assert err.value.args[0] == ("ObsPy Trace must have an sac attribute.")
# Trigger error when a SEED files has differing origins.
filename = os.path.join(DATA, "dataless.seed.BW_FURT")
p = obspy.io.xseed.parser.Parser(filename)
p.blockettes[52][1].latitude += 1
with pytest.raises(ReceiverParseError) as err:
Receiver.parse(p)
assert err.value.args[0] == ("The coordinates of the channels of station "
"'BW.FURT' are not identical.")
# Same thing but this time with a file.
tmpfile = os.path.join(tmpdir.strpath, "temp.seed")
p.write_seed(tmpfile)
with pytest.raises(ReceiverParseError) as err:
Receiver.parse(tmpfile)
assert err.value.args[0] == ("The coordinates of the channels of station "
"'BW.FURT' are not identical.")
# Parsing random string.
with pytest.raises(ValueError) as err:
Receiver.parse("random_string")
assert err.value.args[0] == "'random_string' could not be parsed."
def test_error_handling_when_parsing_station_files(tmpdir):
"""
Tests error handling when parsing station files.
"""
# Differing coordinates for channels of the same station.
inv = obspy.read_inventory()
with pytest.raises(ReceiverParseError) as err:
inv[0][0][0].latitude -= 10
Receiver.parse(inv)
assert err.value.args[0] == ("The coordinates of the channels of station "
"'GR.FUR' are not identical.")
# Once again, with a file.
with io.BytesIO() as buf:
inv.write(buf, format="stationxml")
buf.seek(0)
with pytest.raises(ReceiverParseError) as err:
Receiver.parse(buf)
assert err.value.args[0] == ("The coordinates of the channels of station "
"'GR.FUR' are not identical.")
# ObsPy Trace without a sac attribute.
with pytest.raises(ReceiverParseError) as err:
Receiver.parse(obspy.read())
assert err.value.args[0] == ("ObsPy Trace must have an sac attribute.")
# Trigger error when a SEED files has differing origins.
filename = os.path.join(DATA, "dataless.seed.BW_FURT")
p = obspy.io.xseed.parser.Parser(filename)
p.blockettes[52][1].latitude += 1
with pytest.raises(ReceiverParseError) as err:
Receiver.parse(p)
assert err.value.args[0] == ("The coordinates of the channels of station "
"'BW.FURT' are not identical")
# Same thing but this time with a file.
tmpfile = os.path.join(tmpdir.strpath, "temp.seed")
p.write_seed(tmpfile)
with pytest.raises(ReceiverParseError) as err:
Receiver.parse(tmpfile)
assert err.value.args[0] == ("The coordinates of the channels of station "
"'BW.FURT' are not identical")
# Parsing random string.
with pytest.raises(ValueError) as err:
Receiver.parse("random_string")
assert err.value.args[0] == "'random_string' could not be parsed."
def iterate(self):
src = Source(latitude=10, longitude=10)
rec = Receiver(latitude=20, longitude=20)
self.db.get_seismograms(source=src,
receiver=rec,
return_obspy_stream=False)
def iterate(self):
src = Source(latitude=10, longitude=10)
rec = Receiver(latitude=20, longitude=20)
self.db.get_seismograms(source=src, receiver=rec)