def stackarray(binfile, chr, window, shift):
mn = binfile.mapping[chr]
m, n = zip(*mn)
m = np.array(m, dtype="float")
n = np.array(n, dtype="float")
w = window / shift
m = moving_sum(m, window=w)
n = moving_sum(n, window=w)
m /= n
return m
def stackarray(binfile, chr, window, shift):
mn = binfile.mapping[chr]
m, n = zip(*mn)
m = np.array(m, dtype="float")
n = np.array(n, dtype="float")
w = window / shift
m = moving_sum(m, window=w)
n = moving_sum(n, window=w)
m /= n
return m
def linearray(binfile, chr, window, shift):
mn = binfile.mapping[chr]
m, n = zip(*mn)
m = np.array(m, dtype="float")
w = window / shift
m = moving_sum(m, window=w)
return m
def linearray(binfile, chr, window, shift):
mn = binfile.mapping[chr]
m, n = zip(*mn)
m = np.array(m, dtype="float")
w = window / shift
m = moving_sum(m, window=w)
return m
