def test_all(self):
num_axrefs = 0
nk = 0
for i in self.manager.all_individual():
show(i)
for f in i.facts_out():
axrefs = f.axiomrefs
num_axrefs += len(axrefs)
anns = f.annotations
if len(anns) > 0:
dict = annotations_to_dict(anns)
print(str(dict))
nk += len(dict.keys())
self.assertTrue(num_axrefs > 0)
self.assertTrue(nk > 0)
def convert(self):
o = self._ontology_manager
g = nx.DiGraph()
self._graph = g
for c in o.all_cls():
self.add_node(c)
for s in c.superclasses():
self.add_edge(c,s,'subClassOf')
for (p,ds) in c.svf_superclass_map().items():
for d in ds:
self.add_edge(c,d,p)
for i in o.all_individual():
self.add_node(i)
for f in i.facts_out():
dict = annotations_to_dict(f.annotations)
self.add_edge(f.s, f.o, f.p, dict)
def convert(self):
o = self._ontology_manager
g = nx.DiGraph()
self._graph = g
for c in o.all_cls():
self.add_node(c)
for s in c.superclasses():
self.add_edge(c, s, 'subClassOf')
for (p, ds) in c.svf_superclass_map().items():
for d in ds:
self.add_edge(c, d, p)
for i in o.all_individual():
self.add_node(i)
for f in i.facts_out():
dict = annotations_to_dict(f.annotations)
self.add_edge(f.s, f.o, f.p, dict)