def test_nothing_assembled_false(self, info): assembler = BaseAssembler('args', 'db_conn') assembler.set_state('blast_db', 'query_file', 99) assembler.file['output'] = 'tests/data/load_seq1.txt' assert not assembler.nothing_assembled() info.assert_not_called()
def test_nothing_assembled_empty(self, info): assembler = BaseAssembler('args', 'db_conn') assembler.set_state('blast_db', 'query_file', 99) assembler.file['output'] = 'tests/data/empty_file.txt' assert assembler.nothing_assembled() expect = 'No new assemblies in iteration {}'.format( assembler.state['iteration']) info.assert_called_once_with(expect)