def get_mol(self):
'''Returns mol'''
structure = parsers.get_mol(self.__chebi_id)
if structure is None:
structure = parsers.get_mol(self.get_parent_id())
if structure is None:
for parent_or_child_id in self.__get_all_ids():
structure = parsers.get_mol(parent_or_child_id)
if structure is not None:
break
return None if structure is None else structure.get_structure()
def __get_mol_id(self, chebi_id):
'''COMMENT'''
directory = os.path.dirname(os.path.realpath(__file__))
textfile_read = open(directory + '/ChEBI_' + str(chebi_id) +
'.mol', 'r')
mol_read = textfile_read.read()
this_structure = Structure(mol_read, Structure.mol, 2)
self.assertEquals(this_structure, parsers.get_mol(chebi_id))
def __get_mol_id(self, chebi_id):
'''COMMENT'''
directory = os.path.dirname(os.path.realpath(__file__))
textfile_read = open(directory + '/ChEBI_' + str(chebi_id) + '.mol',
'r')
mol_read = textfile_read.read()
this_structure = Structure(mol_read, Structure.mol, 2)
self.assertEquals(this_structure, parsers.get_mol(chebi_id))
def test_get_mol_neg(self):
'''COMMENT'''
self.assertIsNone(parsers.get_mol(-1))
def test_get_mol_missing(self):
'''COMMENT'''
self.assertIsNone(parsers.get_mol(1))
def test_get_mol_neg(self):
'''COMMENT'''
self.assertIsNone(parsers.get_mol(-1))
def test_get_mol_missing(self):
'''COMMENT'''
self.assertIsNone(parsers.get_mol(1))