args = parser.parse_args()
# Check tracking DB is sqlite (and add as convenience if forgotten).
trackingDb = args.trackingDb
print('Using tracking database at %s' % (trackingDb))
global startRunId
startRunId = -666
# If given a directory argument:
if args.mafDir is not None:
mafDir = os.path.realpath(args.mafDir)
if not os.path.isdir(mafDir):
print('There is no directory containing MAF outputs at %s.' % (mafDir))
print('Just opening using tracking db at %s.' % (trackingDb))
else:
addRunToDatabase(mafDir, trackingDb, mafComment=args.mafComment)
# Open tracking database and start visualization.
global runlist
runlist = MafTracking(trackingDb)
if startRunId < 0:
startRunId = runlist.runs[0]['mafRunId']
# Set up path to template and favicon paths, and load templates.
mafDir = os.getenv('SIMS_MAF_DIR')
templateDir = os.path.join(mafDir, 'python/lsst/sims/maf/web/templates/')
global faviconPath
faviconPath = os.path.join(mafDir, 'python/lsst/sims/maf/web/')
global jsPath
jsPath = os.path.join(mafDir, 'python/lsst/sims/maf/web/')
env = Environment(loader=FileSystemLoader(templateDir))
# Add 'zip' to jinja templates.
if args.db is None:
if os.path.isfile('trackingDb_sqlite.db'):
os.remove('trackingDb_sqlite.db')
db_files = glob.glob('*.db')
else:
db_files = [args.db]
run_names = [
os.path.basename(name).replace('.db', '') for name in db_files
]
for filename, name in zip(db_files, run_names):
if os.path.isdir(name + '_glance'):
shutil.rmtree(name + '_glance')
opsdb = db.OpsimDatabaseV4(filename)
colmap = batches.ColMapDict()
bdict = {}
bdict.update(batches.glanceBatch(colmap, name))
bdict.update(batches.fOBatch(colmap, name))
resultsDb = db.ResultsDb(outDir=name + '_glance')
group = mb.MetricBundleGroup(bdict,
opsdb,
outDir=name + '_glance',
resultsDb=resultsDb,
saveEarly=False)
group.runAll(clearMemory=True, plotNow=True)
resultsDb.close()
opsdb.close()
db.addRunToDatabase(name + '_glance', 'trackingDb_sqlite.db', None,
name, '', '', name + '.db')
import glob
import shutil
import lsst.sims.maf.batches as batches
import lsst.sims.maf.db as db
import lsst.sims.maf.metricBundles as mb
if __name__ == "__main__":
"""
Run the science batch on all .db files in a directory.
"""
db_files = glob.glob('*.db')
run_names = [name.replace('.db', '') for name in db_files]
for name in run_names:
opsdb = db.OpsimDatabaseV4(name + '.db')
colmap = batches.ColMapDict('OpsimV4')
if os.path.isdir('sci_' + name):
shutil.rmtree('sci_' + name)
bdict = batches.scienceRadarBatch()
resultsDb = db.ResultsDb(outDir='sci_' + name)
group = mb.MetricBundleGroup(bdict,
opsdb,
outDir='sci_' + name,
resultsDb=resultsDb,
saveEarly=False)
group.runAll(clearMemory=True, plotNow=True)
resultsDb.close()
opsdb.close()
db.addRunToDatabase('sci_' + name, 'trackingDb_sqlite.db', None, name,
'', '', name + '.db')
# Check tracking DB is sqlite (and add as convenience if forgotten).
trackingDb = args.trackingDb
print('Using tracking database at %s' % (trackingDb))
global startRunId
startRunId = -666
# If given a directory argument:
if args.mafDir is not None:
mafDir = os.path.realpath(args.mafDir)
if not os.path.isdir(mafDir):
print('There is no directory containing MAF outputs at %s.' %
(mafDir))
print('Just opening using tracking db at %s.' % (trackingDb))
else:
addRunToDatabase(mafDir, trackingDb, mafComment=args.mafComment)
# Open tracking database and start visualization.
global runlist
runlist = MafTracking(trackingDb)
if startRunId < 0:
startRunId = runlist.runs[0]['mafRunId']
# Set up path to template and favicon paths, and load templates.
mafDir = os.getenv('SIMS_MAF_DIR')
templateDir = os.path.join(mafDir, 'python/lsst/sims/maf/web/templates/')
global faviconPath
faviconPath = os.path.join(mafDir, 'python/lsst/sims/maf/web/')
global jsPath
jsPath = os.path.join(mafDir, 'python/lsst/sims/maf/web/')
env = Environment(loader=FileSystemLoader(templateDir))
# Add 'zip' to jinja templates.
help="Comment on MAF analysis.")
parser.add_argument("--group",
type=str,
default=None,
help="Opsim Group name.")
parser.add_argument("--opsimRun",
type=str,
default=None,
help="Opsim Run Name.")
parser.add_argument("--opsimComment",
type=str,
default=None,
help="Comment on OpSim run.")
parser.add_argument("--dbFile",
type=str,
default='None',
help="Opsim Sqlite filename")
defaultdb = 'trackingDb_sqlite.db'
parser.add_argument(
"-t",
"--trackingDb",
type=str,
default=defaultdb,
help=
"Tracking database filename. Default is %s, in the current directory."
% (defaultdb))
args = parser.parse_args()
addRunToDatabase(args.mafDir, args.trackingDb, args.group, args.opsimRun,
args.opsimComment, args.mafComment, args.dbFile)
"""
parser = argparse.ArgumentParser()
parser.add_argument("filename", type=str, help="OpSim database")
args = parser.parse_args()
filename = args.filename
name = filename.replace('.db', '')
outDir = 'radar_' + name
if os.path.isdir(name):
shutil.rmtree(name)
opsdb = db.OpsimDatabaseV4(name + '.db')
colmap = batches.ColMapDict('OpsimV4')
bdict = {}
bdict.update(batches.scienceRadarBatch(colmap, name))
resultsDb = db.ResultsDb(outDir=outDir)
group = mb.MetricBundleGroup(bdict,
opsdb,
outDir=outDir,
resultsDb=resultsDb,
saveEarly=False)
group.runAll(clearMemory=True, plotNow=True)
resultsDb.close()
opsdb.close()
db.addRunToDatabase(outDir, 'trackingDb_sqlite.db', None, name, '', '',
name + '.db')