def display(self, workspace, figure):
if self.show_window:
figure.set_subplots((1, 1))
figure.clf()
ax = figure.subplot(0, 0)
gridding = cpg.CPGridInfo()
gridding.deserialize(workspace.display_data.gridding)
self.display_grid(workspace.display_data.background_image,
gridding,
workspace.display_data.image_set_number, ax)
def display(self, workspace, figure):
if self.show_window:
figure.set_subplots((1, 1))
figure.clf()
ax = figure.subplot(0, 0)
gridding = cpg.CPGridInfo()
gridding.deserialize(workspace.display_data.gridding)
self.display_grid(
workspace.display_data.background_image, gridding, workspace.display_data.image_set_number, ax
)
def display(self, workspace, figure):
orig_image_pixel_data = workspace.display_data.orig_image_pixel_data
cropped_pixel_data = workspace.display_data.cropped_pixel_data
figure.set_subplots((2, 1))
title = "Original: %s, cycle # %d" % (self.image_name.value,
workspace.display_data.image_set_number)
figure.subplot_imshow_grayscale(0, 0, orig_image_pixel_data, title)
figure.subplot_imshow_bw(1, 0, cropped_pixel_data,
self.cropped_image_name.value,
sharexy=figure.subplot(0, 0))
def display(self, workspace, figure):
orig_image_pixel_data = workspace.display_data.orig_image_pixel_data
cropped_pixel_data = workspace.display_data.cropped_pixel_data
figure.set_subplots((2, 1))
title = "Original: %s, cycle # %d" % (
self.image_name.value, workspace.display_data.image_set_number)
figure.subplot_imshow_grayscale(0, 0, orig_image_pixel_data, title)
figure.subplot_imshow_bw(1,
0,
cropped_pixel_data,
self.cropped_image_name.value,
sharexy=figure.subplot(0, 0))
def display(self, workspace, figure):
figure.set_subplots((1, 1))
ax = figure.subplot(0, 0)
title = "%s_%s" % (
self.objects_name.value if self.objects_or_image == OI_OBJECTS else
cellprofiler_core.measurement.IMAGE,
self.measurement.value,
)
def imshow_fn(pixel_data):
if pixel_data.ndim == 3:
figure.subplot_imshow_color(0, 0, pixel_data, title=title)
else:
figure.subplot_imshow_grayscale(0, 0, pixel_data, title=title)
self.display_on_figure(workspace, ax, imshow_fn)
