def test_document_funcs_for_smoke():
global run_start_uid, descriptor_uid
# todo this next line will break once NSLS-II/metadatastore#142 is merged
run_start, = find_run_starts(uid=run_start_uid)
descriptors = [desc for desc in find_event_descriptors(uid=descriptor_uid)]
run_stop, = find_run_stops(uid=run_stop_uid)
documents = [run_start, run_stop]
documents.extend(descriptors)
attrs = ['__repr__', '__str__', '_repr_html_', ]
for doc, attr in product(documents, attrs):
getattr(doc, attr)()
def mock_run_start(run_start_uid=None, sleep=0, make_run_stop=True):
if run_start_uid is None:
blc_uid = insert_beamline_config({}, time=get_time())
run_start_uid = insert_run_start(time=get_time(), scan_id=1,
beamline_id='example',
uid=str(uuid.uuid4()),
beamline_config=blc_uid)
# these events are already the sanitized version, not raw mongo objects
events = func(run_start_uid, sleep)
# Infer the end run time from events, since all the times are
# simulated and not necessarily based on the current time.
time = max([event['time'] for event in events])
if make_run_stop:
run_stop_uid = insert_run_stop(run_start_uid, time=get_time(),
exit_status='success')
run_stop, = find_run_stops(uid=run_stop_uid)
return events
def mock_run_start(run_start_uid=None, sleep=0, make_run_stop=True):
if run_start_uid is None:
run_start_uid = insert_run_start(time=get_time(),
scan_id=1,
beamline_id='example',
uid=str(uuid.uuid4()))
# these events are already the sanitized version, not raw mongo objects
events = func(run_start_uid, sleep)
# Infer the end run time from events, since all the times are
# simulated and not necessarily based on the current time.
time = max([event['time'] for event in events])
if make_run_stop:
run_stop_uid = insert_run_stop(run_start_uid,
time=time,
exit_status='success',
uid=str(uuid.uuid4()))
run_stop, = find_run_stops(uid=run_stop_uid)
return events
def from_run_start(cls, run_start, verify_integrity=True):
"""
Build a Header from a RunStart Document.
Parameters
----------
run_start : metadatastore.document.Document
Returns
-------
header : dataportal.broker.Header
"""
header = Header()
header._name = "Header"
header.event_descriptors = list(
find_event_descriptors(run_start=run_start))
run_stops = list(find_run_stops(run_start=run_start.uid))
try:
run_stop, = run_stops
except ValueError:
num = len(run_stops)
run_stop = None
if num == 0:
error_msg = ("A RunStop record could not be found for the "
"run with run_start_uid {0}".format(run_start.uid))
warnings.warn(error_msg)
else:
error_msg = (
"{0} RunStop records (uids {1}) were found for the run "
"with run_start_uid {2}".format(
num, [rs.uid for rs in run_stops], run_start.uid))
if verify_integrity:
raise IntegrityError(error_msg)
else:
warnings.warn(error_msg)
# Map keys from RunStart and RunStop onto Header.
run_start_renames = {'start_time': 'time',
'start_datetime': 'time_as_datetime',
'scan_id': 'scan_id',
'beamline_id': 'beamline_id',
'owner': 'owner',
'group': 'group',
'project': 'project',
'run_start_id': 'id',
'run_start_uid': 'uid'}
run_start_renames_back = {v: k for k, v
in run_start_renames.items()}
for k in run_start:
new_key = run_start_renames_back.get(k, k)
header[new_key] = run_start[k]
if run_stop is not None:
run_stop_renames = {'stop_time': 'time',
'stop_datetime': 'time_as_datetime',
'exit_reason': 'reason',
'exit_status': 'exit_status',
'run_stop_id': 'id',
'run_stop_uid': 'uid'}
run_stop_renames_back = {v: k for k, v
in run_stop_renames.items()}
for k in run_stop:
new_key = run_stop_renames_back.get(k, k)
header[new_key] = run_stop[k]
del header['run_start']
run_start._name = 'Header'
# Strip unuseful recursion. We don't mess with underlying Documents,
# but the header is a special case, and the repr should reflect
# its structure accurately.
for ev_desc in header.event_descriptors:
ev_desc.run_start = ev_desc.run_start.uid
return header