def complete_job(
jobid=None,
dbpath=None,
):
"""Mark the job as 'Complete' if possible
Arguments:
dbpath: Path to JobDB database. If not given, use default database (see JobDB().__init__)
jobid: jobid str of job to mark 'Complete'. If not given, uses current job id from the
environment variable 'PBS_JOBID'
"""
db = JobDB(dbpath) #pylint: disable=invalid-name
if db.config["software"] == "torque":
# import misc_torque as misc_pbs #pylint: disable=redefined-outer-name
misc_pbs = __import__("pbs.misc_torque", globals(), locals(), [],
-1).misc_torque
elif db.config["software"] == "slurm":
# import misc_slurm as misc
# import misc_torque as misc_pbs #pylint: disable=redefined-outer-name
misc_pbs = __import__("pbs.misc_slurm", globals(), locals(), [],
-1).misc_slurm
else:
# import misc_torque as misc_pbs #pylint: disable=redefined-outer-name
misc_pbs = __import__("pbs.misc_torque", globals(), locals(), [],
-1).misc_torque
if jobid is None:
jobid = misc_pbs.job_id()
if jobid is None:
raise misc.PBSError(0, "Could not determine jobid")
try:
job = db.select_job(jobid) #pylint: disable=unused-variable
except JobDBError as e: #pylint: disable=invalid-name
raise e
try:
db.complete_job(jobid)
except EligibilityError as e: #pylint: disable=invalid-name
raise e
db.close()
def error_job(message, jobid=None, dbpath=None):
"""Mark the job as 'Complete' if possible
Arguments:
dbpath: Path to JobDB database. If not given, use default database (see JobDB().__init__)
jobid: jobid str of job to mark 'Complete'. If not given, uses current job id from the
environment variable 'PBS_JOBID'
"""
db = JobDB(dbpath) #pylint: disable=invalid-name
if jobid is None:
jobid = misc_pbs.job_id()
if jobid is None:
raise misc.PBSError(0, "Could not determine jobid")
try:
job = db.select_job(jobid)
except JobDBError as e: #pylint: disable=invalid-name
raise e
db.error_job(message, job=job)
db.close()