def __getitem__(self, indx):
ret = modutil.handle_seq_indx(self, indx, self.mdl._indxatm,
(self.offset, self.length, self.suffix))
if isinstance(ret, int):
return self.mdl._atom_class(self.mdl, ret + self.offset)
else:
return [self[ind] for ind in ret]
def __getitem__(self, indx):
ret = modutil.handle_seq_indx(self, indx,
_modeller.mod_alignment_find_code,
(self.modpt,))
if isinstance(ret, int):
if _modeller.mod_alnsequence_has_structure(self.modpt, ret):
return alnstructure.Structure(self, ret)
else:
return alnsequence.Sequence(self, ret)
else:
return [self[ind] for ind in ret]
def __getitem__(self, indx):
ret = modutil.handle_seq_indx(self, indx)
if isinstance(ret, int):
return Residue(self.seq, ret)
else:
return [self[ind] for ind in ret]
def __delitem__(self, indx):
ret = modutil.handle_seq_indx(self, indx,
_modeller.mod_alignment_find_code,
(self.modpt,))
_modeller.mod_alnsequence_del(self.modpt, ret)
def __getitem__(self, indx):
ret = modutil.handle_seq_indx(self, indx, self.seq._indxseg, (0, None))
if isinstance(ret, int):
return self.seq._chain_class(self.seq, ret)
else:
return [self[ind] for ind in ret]
def __getitem__(self, indx):
ret = modutil.handle_seq_indx(self, indx)
if isinstance(ret, int):
return self.seq._residue_class(self.seq, ret + self.offset)
else:
return [self[ind] for ind in ret]
def _lookup_index(self, indx, require_inrange=True):
return modutil.handle_seq_indx(self,
indx,
require_inrange=require_inrange)
def _lookup_index(self, indx, require_inrange=True):
return handle_seq_indx(self,
indx,
self.__lookup_atom,
require_inrange=require_inrange)