'/m/028cl7':
[5, 1, '/m/03lty', '/music/genre/subgenre', '/m/028cl7', 'tail'],
'/m/03rg5x': [
4, 1, '/m/0cbd2', '/people/profession/people_with_this_profession',
'/m/03rg5x', 'tail'
]
}
#### LOAD DATASET
print("Loading dataset...")
complex_dataset = Dataset(name=dataset_name, separator="\t", load=True)
### LOAD TRAINED ORIGINAL MODEL
print("Loading original trained model...")
original_model = ComplEx(dataset=complex_dataset,
dimension=dimension,
init_random=True,
init_size=init) # type: ComplEx
original_model.load_state_dict(torch.load(model_path))
original_model.to('cuda')
### FOR EACH ENTITY, PERFORM A KELPIE ANALYSIS
for entity_to_explain in entity_2_params:
train_degree, test_degree, head, relation, tail, perspective = entity_2_params[
entity_to_explain]
print(
"\nWorking with entity %s (train degree %i; test degree %i): explaining fact <%s, %s, %s>."
% (entity_to_explain, train_degree, test_degree, head, relation, tail))
# get the ids of the elements of the fact to explain and the perspective entity
head_id, relation_id, tail_id = complex_dataset.get_id_for_entity_name(head), \
complex_dataset.get_id_for_relation_name(relation), \
'/m/01tnbn': [72, 7, '/m/0cbd2', '/people/profession/people_with_this_profession', '/m/01tnbn', 'tail'],
'/m/028d4v': [69, 11, '/m/028d4v', '/people/person/profession', '/m/0dxtg', 'head'],
'/m/03193l': [43, 5, '/m/03193l', '/common/topic/webpage./common/webpage/category', '/m/08mbj32', 'head'],
'/m/0g2ff': [29, 4, '/m/0g2ff', '/music/performance_role/regular_performances./music/group_membership/role', '/m/0mkg', 'head'],
'/m/0269kx': [21, 1, '/m/0h52w', '/protected_sites/natural_or_cultural_site_designation/sites./protected_sites/natural_or_cultural_site_listing/listed_site', '/m/0269kx', 'tail'],
'/m/028cl7': [5, 1, '/m/03lty', '/music/genre/subgenre', '/m/028cl7', 'tail'],
'/m/03rg5x': [4, 1, '/m/0cbd2', '/people/profession/people_with_this_profession', '/m/03rg5x', 'tail']
}
#### LOAD DATASET
print("Loading dataset...")
complex_dataset = Dataset(name=dataset_name, separator="\t", load=True)
### LOAD TRAINED ORIGINAL MODEL
print("Loading original trained model...")
original_model = ComplEx(dataset=complex_dataset, dimension=dimension, init_random=True, init_size=init) # type: ComplEx
original_model.load_state_dict(torch.load(model_path))
original_model.to('cuda')
### FOR EACH ENTITY, PERFORM A KELPIE ANALYSIS
for entity_to_explain in entity_2_params:
train_degree, test_degree, head, relation, tail, perspective = entity_2_params[entity_to_explain]
print("\nWorking with entity %s (train degree %i; test degree %i): explaining fact <%s, %s, %s>." %
(entity_to_explain, train_degree, test_degree, head, relation, tail))
# get the ids of the elements of the fact to explain and the perspective entity
head_id, relation_id, tail_id = complex_dataset.get_id_for_entity_name(head), \
complex_dataset.get_id_for_relation_name(relation), \
complex_dataset.get_id_for_entity_name(tail)
original_entity_id = head_id if perspective == 'head' else tail_id
original_dataset.get_id_for_entity_name(tail)
original_entity_id = head_id if args.perspective == "head" else tail_id
# create the fact to explain as a numpy array of its ids
original_triple = (head_id, relation_id, tail_id)
original_sample = numpy.array(original_triple)
# check that the fact to explain is actually a test fact
assert(original_sample in original_dataset.test_samples)
############# INITIALIZE MODELS AND THEIR STRUCTURES
print("Loading model at location %s..." % args.model_path)
# instantiate and load the original model from filesystem
original_model = ComplEx(dataset=original_dataset,
dimension=args.dimension,
init_random=True,
init_size=args.init) # type: ComplEx
original_model.load_state_dict(torch.load(args.model_path))
original_model.to('cuda')
kelpie_dataset = KelpieDataset(dataset=original_dataset, entity_id=original_entity_id)
############ EXTRACT TEST FACTS AND TRAINING FACTS
print("Extracting train and test samples for the original and the kelpie entities...")
# extract all training facts and test facts involving the entity to explain
# and replace the id of the entity to explain with the id of the fake kelpie entity
original_test_samples = kelpie_dataset.original_test_samples
kelpie_test_samples = kelpie_dataset.kelpie_test_samples
kelpie_train_samples = kelpie_dataset.kelpie_train_samples
def rbo(original_model: ComplEx, kelpie_model: KelpieComplEx,
original_samples: numpy.array, kelpie_samples: numpy.array):
_, original_ranks, original_predictions = original_model.predict_samples(
original_samples)
_, kelpie_ranks, kelpie_predictions = kelpie_model.predict_samples(
samples=kelpie_samples, original_mode=False)
all_original_ranks = []
for (a, b) in original_ranks:
all_original_ranks.append(a)
all_original_ranks.append(b)
all_kelpie_ranks = []
for (a, b) in kelpie_ranks:
all_kelpie_ranks.append(a)
all_kelpie_ranks.append(b)
original_mrr = mrr(all_original_ranks)
kelpie_mrr = mrr(all_kelpie_ranks)
original_h1 = hits_k(all_original_ranks, 1)
kelpie_h1 = hits_k(all_kelpie_ranks, 1)
rbos = []
for i in range(len(original_samples)):
_original_sample = original_samples[i]
_kelpie_sample = kelpie_samples[i]
original_target_head, _, original_target_tail = _original_sample
kelpie_target_head, _, kelpie_target_tail = _kelpie_sample
original_target_head_index, original_target_tail_index = int(
original_ranks[i][0] - 1), int(original_ranks[i][1] - 1)
kelpie_target_head_index, kelpie_target_tail_index = int(
kelpie_ranks[i][0] - 1), int(kelpie_ranks[i][1] - 1)
# get head and tail predictions
original_head_predictions = original_predictions[i][0]
kelpie_head_predictions = kelpie_predictions[i][0]
original_tail_predictions = original_predictions[i][1]
kelpie_tail_predictions = kelpie_predictions[i][1]
assert original_head_predictions[
original_target_head_index] == original_target_head
assert kelpie_head_predictions[
kelpie_target_head_index] == kelpie_target_head
assert original_tail_predictions[
original_target_tail_index] == original_target_tail
assert kelpie_tail_predictions[
kelpie_target_tail_index] == kelpie_target_tail
# replace the target head id with the same value (-1 in this case)
original_head_predictions[original_target_head_index] = -1
kelpie_head_predictions[kelpie_target_head_index] = -1
# cut both lists at the max rank that the target head obtained, between original and kelpie model
original_head_predictions = original_head_predictions[:
original_target_head_index
+ 1]
kelpie_head_predictions = kelpie_head_predictions[:
kelpie_target_head_index
+ 1]
# replace the target tail id with the same value (-1 in this case)
original_tail_predictions[original_target_tail_index] = -1
kelpie_tail_predictions[kelpie_target_tail_index] = -1
# cut both lists at the max rank that the target tail obtained, between original and kelpie model
original_tail_predictions = original_tail_predictions[:
original_target_tail_index
+ 1]
kelpie_tail_predictions = kelpie_tail_predictions[:
kelpie_target_tail_index
+ 1]
rbos.append(
ranking_similarity.rank_biased_overlap(original_head_predictions,
kelpie_head_predictions))
rbos.append(
ranking_similarity.rank_biased_overlap(original_tail_predictions,
kelpie_tail_predictions))
avg_rbo = float(sum(rbos)) / float(len(rbos))
return avg_rbo, original_mrr, kelpie_mrr, original_h1, kelpie_h1
'/m/028cl7':
[5, 1, '/m/03lty', '/music/genre/subgenre', '/m/028cl7', 'tail'],
'/m/03rg5x': [
4, 1, '/m/0cbd2', '/people/profession/people_with_this_profession',
'/m/03rg5x', 'tail'
]
}
#### LOAD DATASET
print("Loading dataset...")
complex_dataset = Dataset(name=dataset_name, separator="\t", load=True)
### LOAD TRAINED ORIGINAL MODEL
print("Loading original trained model...")
original_model = ComplEx(dataset=complex_dataset,
dimension=dimension,
init_random=True,
init_size=init) # type: ComplEx
original_model.load_state_dict(torch.load(model_path))
original_model.to('cuda')
### FOR EACH ENTITY, PERFORM A KELPIE ANALYSIS
for entity_to_explain in entity_2_params:
train_degree, test_degree, head, relation, tail, perspective = entity_2_params[
entity_to_explain]
print(
"\nWorking with entity %s (train degree %i; test degree %i): explaining fact <%s, %s, %s>."
% (entity_to_explain, train_degree, test_degree, head, relation, tail))
# get the ids of the elements of the fact to explain and the perspective entity
head_id, relation_id, tail_id = complex_dataset.get_id_for_entity_name(head), \
complex_dataset.get_id_for_relation_name(relation), \
torch.backends.cudnn.deterministic = True
if args.load is not None:
model_path = args.load
else:
model_path = os.path.join(MODEL_PATH,
"_".join(["ComplEx", args.dataset]) + ".pt")
if not os.path.isdir(MODEL_PATH):
os.makedirs(MODEL_PATH)
print("Loading %s dataset..." % args.dataset)
dataset = Dataset(name=args.dataset, separator="\t", load=True)
print("Initializing model...")
model = ComplEx(dataset=dataset,
dimension=args.dimension,
init_random=True,
init_size=args.init) # type: ComplEx
model.to('cuda')
if args.load is not None:
model.load_state_dict(torch.load(model_path))
print("Training model...")
optimizer = MultiClassNLLptimizer(model=model,
optimizer_name=args.optimizer,
batch_size=args.batch_size,
learning_rate=args.learning_rate,
decay1=args.decay1,
decay2=args.decay2,
regularizer_name='N3',
regularizer_weight=args.reg)
def compute_fact_relevance(model: ComplEx,
dataset: Dataset,
sample_to_explain,
perspective="head",
perturbation_step=0.05,
lambd=1):
head_id, relation_id, tail_id = sample_to_explain
entity_to_explain_id = head_id if perspective == "head" else tail_id
# get the embedding of the head entity, of the relation, and of the tail entity of the fact to explain
head_embedding = model.entity_embeddings[head_id].detach().reshape(
1, model.dimension * 2)
relation_embedding = model.relation_embeddings[relation_id].detach(
).reshape(1, model.dimension * 2)
tail_embedding = model.entity_embeddings[tail_id].detach().reshape(
1, model.dimension * 2)
# set the requires_grad flag of the embedding of the entity to explain to true
entity_to_explain_embedding = head_embedding if perspective == "head" else tail_embedding
entity_to_explain_embedding.requires_grad = True
# compute the score of the fact, and extract the gradient of the embedding of the entity to explain
# then, perturbate the embedding of the entity to explain
score = model.score_embeddings(head_embedding, relation_embedding,
tail_embedding)
score.backward()
gradient = entity_to_explain_embedding.grad[0]
perturbed_entity_to_explain_embedding = entity_to_explain_embedding.detach(
) - perturbation_step * gradient.detach()
# extract all training samples containing the entity to explain, and compute their scores
samples_containing_entity_to_explain = numpy.array([
(h, r, t) for (h, r, t) in dataset.train_samples
if entity_to_explain_id in [h, t]
])
original_scores = model.score(samples_containing_entity_to_explain)
# extract the embeddings for the head entities, relations, and tail entities
# of all training samples containing the entity to explain;
head_embeddings = model.entity_embeddings[
samples_containing_entity_to_explain[:, 0]]
relation_embeddings = model.relation_embeddings[
samples_containing_entity_to_explain[:, 1]]
tail_embeddings = model.entity_embeddings[
samples_containing_entity_to_explain[:, 2]]
# for the entity to explain, use the perturbed embedding rather than the original one
for i in range(samples_containing_entity_to_explain.shape[0]):
(h, r, t) = samples_containing_entity_to_explain[i]
if h == entity_to_explain_id:
head_embeddings[i] = perturbed_entity_to_explain_embedding
elif t == entity_to_explain_id:
tail_embeddings[i] = perturbed_entity_to_explain_embedding
# compute the scores of all training samples containing the entity to explain
# using its perturbed embedding rather than the original one
perturbed_scores = model.score_embeddings(
head_embeddings, relation_embeddings,
tail_embeddings).detach().cpu().numpy()
# now for each training sample containing the entity to explain you have
# both the original score and the score computed with the perturbed embedding
# so you can compute the relevance of that training sample as original_score - lambda * perturbed_score
sample_2_relevance = {}
for i in range(samples_containing_entity_to_explain.shape[0]):
sample_2_relevance[tuple(samples_containing_entity_to_explain[i])] = (
original_scores[i] - lambd * perturbed_scores[i])[0]
most_relevant_samples = sorted(sample_2_relevance.items(),
key=lambda x: x[1],
reverse=True)
return most_relevant_samples
original_dataset.get_id_for_relation_name(relation), \
original_dataset.get_id_for_entity_name(tail)
original_entity_id = head_id if args.perspective == "head" else tail_id
# create the fact to explain as a numpy array of its ids
original_sample_tuple = (head_id, relation_id, tail_id)
original_sample = numpy.array(original_sample_tuple)
# check that the fact to explain is actually a test fact
assert(original_sample in original_dataset.test_samples)
############# INITIALIZE MODELS AND THEIR STRUCTURES
print("Loading model at location %s..." % args.model_path)
# instantiate and load the original model from filesystem
original_model = ComplEx(dataset=original_dataset, dimension=args.dimension, init_random=True, init_size=args.init) # type: ComplEx
original_model.load_state_dict(torch.load(args.model_path))
original_model.to('cuda')
print("Wrapping the original model in a Kelpie explainable model...")
# use model_to_explain to initialize the Kelpie model
kelpie_dataset = KelpieDataset(dataset=original_dataset, entity_id=original_entity_id)
kelpie_model = KelpieComplEx(model=original_model, dataset=kelpie_dataset, init_size=1e-3) # type: KelpieComplEx
kelpie_model.to('cuda')
############ EXTRACT TEST FACTS AND TRAINING FACTS
print("Extracting train and test samples for the original and the kelpie entities...")
# extract all training facts and test facts involving the entity to explain
# and replace the id of the entity to explain with the id of the fake kelpie entity
