def main(): # This command loads the file into the path '/model', and tells # the system to use the gsl solver. modelId = moose.loadModel( '../Genesis_files/reaction.g', 'model', 'gsl' ) moose.start( 100.0 ) # Run the model for 100 seconds. # Iterate through all plots, dump their contents to data.plot. for x in moose.wildcardFind( '/model/graphs/conc#/#' ): moose.element( x[0] ).xplot( 'data.plot', x[0].name ) moose.saveModel( modelId, 'saveReaction.g' ) quit()
# modify it under the terms of the GNU General Public License as
# published by the Free Software Foundation; either version 3, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
# General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program; see the file COPYING. If not, write to
# the Free Software Foundation, Inc., 51 Franklin Street, Fifth
# Floor, Boston, MA 02110-1301, USA.
#
#
# Code:
"""This example illustrates loading a kinetic model defined in Genesis format
into Moose using "loadModel" function and using "saveModel" function one can
save the model back to Genesis format
"""
import sys
#sys.path.append('../../python')
import moose
if __name__ == '__main__':
""" The script demonstates to convert Chemical (Genesis) file back to Genesis file using moose """
model = moose.loadModel('../genesis/reaction.g', '/model')
moose.saveModel('/model', 'testsave.g')