def test_client_raw_input(self):
# Give the filename of raw data to the client
filename = GadgetronClient.raw_input_filename()
data, header = client(filename)
# Make sure the output is the same as when h5 is given
true_output_data = GadgetronClient.true_output_data()
assert (np.allclose(data, true_output_data))
def test_client_ismrmrd_hdf5_input(self):
# Load in the data so we can pass the client the ismrmrd.Dataset
dataset = GadgetronClient.input_h5()
data, header = client(dataset)
# Make sure we still get the thing we expected
true_output_data = GadgetronClient.true_output_data()
assert (np.allclose(data, true_output_data))
def test_client_filename(self):
# Get the test input data path so we can send file to gadgetron
filename = GadgetronClient.input_filename()
data, header = client(filename)
# Make sure we get the thing we expected
true_output_data = GadgetronClient.true_output_data()
assert (np.allclose(data, true_output_data))
def test_use_default_config(self):
# Give the filename of raw data to the client
filename = GadgetronClient.raw_input_filename()
# Send gadgetron the local default configuration file
config = configs.default()
# print(config)
# data,header = client(filename,config_local=config.get_filename())
data,header = client(filename,config_local=config.tostring())
# Make sure the output is the same as when h5 is given
true_output_data = GadgetronClient.true_output_data()
self.assertTrue(np.allclose(data,true_output_data))
def setUp(self):
self.config = GadgetronConfig()
self.filename = GadgetronClient.grappa_input_filename()
def test_use_generic_cartesian_grappa_config(self):
config = configs.generic_cartesian_grappa()
filename = GadgetronClient.generic_cartesian_grappa_filename()
# print(config.tostring())
data,header = client(filename,config_local=config.tostring())