def _save_bunch(self, precursor, products):
self.serializer.save(ScanBunch(precursor, products))
try:
precursor.clear()
for product in products:
product.clear()
except AttributeError:
pass
def save_bunch(self, precursor, products):
self.serializer.save_scan_bunch(ScanBunch(precursor, products))
def run(self):
writer = AnnotatedMGFSerializer(self.outstream)
for spectrum_match in self.spectrum_match_iterable:
scan = self.prepare_scan(spectrum_match)
writer.save(ScanBunch(None, [scan]))
writer.complete()