예제 #1
0
def test_operators():
    sig = Signal(np.array([0.0]), name="sig")
    assert fnmatch(repr(TimeUpdate(sig, sig)), "<TimeUpdate at 0x*>")
    assert fnmatch(repr(TimeUpdate(sig, sig, tag="tag")),
                   "<TimeUpdate 'tag' at 0x*>")
    assert fnmatch(repr(Reset(sig)), "<Reset at 0x*>")
    assert fnmatch(repr(Reset(sig, tag="tag")), "<Reset 'tag' at 0x*>")
    assert fnmatch(repr(Copy(sig, sig)), "<Copy at 0x*>")
    assert fnmatch(repr(Copy(sig, sig, tag="tag")), "<Copy 'tag' at 0x*>")
    assert fnmatch(repr(ElementwiseInc(sig, sig, sig)),
                   "<ElementwiseInc at 0x*>")
    assert fnmatch(repr(ElementwiseInc(sig, sig, sig, tag="tag")),
                   "<ElementwiseInc 'tag' at 0x*>")
    assert fnmatch(repr(DotInc(sig, sig, sig)), "<DotInc at 0x*>")
    assert fnmatch(repr(DotInc(sig, sig, sig, tag="tag")),
                   "<DotInc 'tag' at 0x*>")
    assert fnmatch(repr(SimPyFunc(sig, lambda x: 0.0, True, sig)),
                   "<SimPyFunc at 0x*>")
    assert fnmatch(
        repr(SimPyFunc(sig, lambda x: 0.0, True, sig, tag="tag")),
        "<SimPyFunc 'tag' at 0x*>",
    )
    assert fnmatch(repr(SimPES(sig, sig, sig, 0.1)), "<SimPES at 0x*>")
    assert fnmatch(repr(SimPES(sig, sig, sig, 0.1, tag="tag")),
                   "<SimPES 'tag' at 0x*>")
    assert fnmatch(repr(SimBCM(sig, sig, sig, sig, 0.1)), "<SimBCM at 0x*>")
    assert fnmatch(repr(SimBCM(sig, sig, sig, sig, 0.1, tag="tag")),
                   "<SimBCM 'tag' at 0x*>")
    assert fnmatch(repr(SimOja(sig, sig, sig, sig, 0.1, 1.0)),
                   "<SimOja at 0x*>")
    assert fnmatch(repr(SimOja(sig, sig, sig, sig, 0.1, 1.0, tag="tag")),
                   "<SimOja 'tag' at 0x*>")
    assert fnmatch(repr(SimVoja(sig, sig, sig, sig, 1.0, sig, 1.0)),
                   "<SimVoja at 0x*>")
    assert fnmatch(
        repr(SimVoja(sig, sig, sig, sig, 0.1, sig, 1.0, tag="tag")),
        "<SimVoja 'tag' at 0x*>",
    )
    assert fnmatch(repr(SimRLS(sig, sig, sig, sig)), "<SimRLS at 0x*>")
    assert fnmatch(
        repr(SimRLS(sig, sig, sig, sig, tag="tag")),
        "<SimRLS 'tag' at 0x*>",
    )
    assert fnmatch(repr(SimNeurons(LIF(), sig, {"sig": sig})),
                   "<SimNeurons at 0x*>")
    assert fnmatch(
        repr(SimNeurons(LIF(), sig, {"sig": sig}, tag="tag")),
        "<SimNeurons 'tag' at 0x*>",
    )
    assert fnmatch(repr(SimProcess(WhiteNoise(), sig, sig, sig)),
                   "<SimProcess at 0x*>")
    assert fnmatch(
        repr(SimProcess(WhiteNoise(), sig, sig, sig, tag="tag")),
        "<SimProcess 'tag' at 0x*>",
    )
예제 #2
0
def test_neuron_types():
    check_init_args(Direct, ["initial_state"])
    check_repr(Direct())
    assert repr(Direct()) == "Direct()"

    check_init_args(RectifiedLinear, ["amplitude", "initial_state"])
    check_repr(RectifiedLinear())
    check_repr(RectifiedLinear(amplitude=2))
    assert repr(RectifiedLinear()) == "RectifiedLinear()"

    check_init_args(SpikingRectifiedLinear, ["amplitude", "initial_state"])
    check_repr(SpikingRectifiedLinear())
    check_repr(SpikingRectifiedLinear(amplitude=2))
    check_repr(
        SpikingRectifiedLinear(initial_state={"voltage": Choice([1.0])}))
    assert repr(SpikingRectifiedLinear()) == "SpikingRectifiedLinear()"

    check_init_args(Sigmoid, ["tau_ref", "initial_state"])
    check_repr(Sigmoid())
    check_repr(Sigmoid(tau_ref=0.1))
    assert repr(Sigmoid()), "Sigmoid()"
    assert repr(Sigmoid(tau_ref=0.001)) == "Sigmoid(tau_ref=0.001)"

    check_init_args(LIFRate,
                    ["tau_rc", "tau_ref", "amplitude", "initial_state"])
    check_repr(LIFRate())
    check_repr(LIFRate(tau_rc=0.1))
    check_repr(LIFRate(tau_ref=0.1))
    check_repr(LIFRate(amplitude=2))
    check_repr(LIFRate(tau_rc=0.05, tau_ref=0.02))
    check_repr(LIFRate(tau_rc=0.05, amplitude=2))
    check_repr(LIFRate(tau_ref=0.02, amplitude=2))
    check_repr(LIFRate(tau_rc=0.05, tau_ref=0.02, amplitude=2))
    assert repr(LIFRate()) == "LIFRate()"
    assert repr(LIFRate(tau_rc=0.01,
                        tau_ref=0)) == "LIFRate(tau_rc=0.01, tau_ref=0)"

    check_init_args(
        LIF,
        ["tau_rc", "tau_ref", "min_voltage", "amplitude", "initial_state"])
    check_repr(LIF())
    check_repr(LIF(tau_rc=0.1))
    check_repr(LIF(tau_ref=0.1))
    check_repr(LIF(amplitude=2))
    check_repr(LIF(min_voltage=-0.5))
    check_repr(LIF(tau_rc=0.05, tau_ref=0.02))
    check_repr(LIF(tau_rc=0.05, amplitude=2))
    check_repr(LIF(tau_ref=0.02, amplitude=2))
    check_repr(LIF(tau_rc=0.05, tau_ref=0.02, amplitude=2))
    check_repr(LIF(tau_rc=0.05, tau_ref=0.02, min_voltage=-0.5, amplitude=2))
    check_repr(LIF(initial_state={"refractory_time": Choice([0.1])}))
    assert repr(LIF()) == "LIF()"
    assert repr(LIF(tau_rc=0.01, tau_ref=0)) == "LIF(tau_rc=0.01, tau_ref=0)"

    check_init_args(
        AdaptiveLIFRate,
        ["tau_n", "inc_n", "tau_rc", "tau_ref", "amplitude", "initial_state"],
    )
    check_repr(AdaptiveLIFRate())
    check_repr(AdaptiveLIFRate(tau_n=0.1))
    check_repr(AdaptiveLIFRate(inc_n=0.5))
    check_repr(AdaptiveLIFRate(tau_rc=0.1))
    check_repr(AdaptiveLIFRate(tau_ref=0.1))
    check_repr(AdaptiveLIFRate(amplitude=2))
    check_repr(
        AdaptiveLIFRate(tau_n=0.1,
                        inc_n=0.5,
                        tau_rc=0.05,
                        tau_ref=0.02,
                        amplitude=2))
    check_repr(AdaptiveLIFRate(initial_state={"adaptation": Choice([0.1])}))
    assert repr(AdaptiveLIFRate()) == "AdaptiveLIFRate()"
    assert (repr(AdaptiveLIFRate(
        tau_rc=0.01, tau_n=0.5,
        inc_n=0.02)) == "AdaptiveLIFRate(tau_n=0.5, inc_n=0.02, tau_rc=0.01)")

    check_init_args(
        AdaptiveLIF,
        [
            "tau_n",
            "inc_n",
            "tau_rc",
            "tau_ref",
            "min_voltage",
            "amplitude",
            "initial_state",
        ],
    )
    check_repr(AdaptiveLIF())
    check_repr(AdaptiveLIF(tau_n=0.1))
    check_repr(AdaptiveLIF(inc_n=0.5))
    check_repr(AdaptiveLIF(tau_rc=0.1))
    check_repr(AdaptiveLIF(tau_ref=0.1))
    check_repr(AdaptiveLIF(min_voltage=-0.5))
    check_repr(
        AdaptiveLIF(
            tau_n=0.1,
            inc_n=0.5,
            tau_rc=0.05,
            tau_ref=0.02,
            min_voltage=-0.5,
            amplitude=2,
        ))
    check_repr(AdaptiveLIF(initial_state={"adaptation": Choice([0.1])}))
    assert repr(AdaptiveLIF()) == "AdaptiveLIF()"
    assert (repr(AdaptiveLIF(
        tau_rc=0.01, tau_n=0.5,
        inc_n=0.02)) == "AdaptiveLIF(tau_n=0.5, inc_n=0.02, tau_rc=0.01)")

    check_init_args(
        Izhikevich,
        [
            "tau_recovery",
            "coupling",
            "reset_voltage",
            "reset_recovery",
            "initial_state",
        ],
    )
    check_repr(Izhikevich())
    check_repr(Izhikevich(tau_recovery=0.1))
    check_repr(Izhikevich(coupling=0.3))
    check_repr(Izhikevich(reset_voltage=-1))
    check_repr(Izhikevich(reset_recovery=5))
    check_repr(
        Izhikevich(tau_recovery=0.1,
                   coupling=0.3,
                   reset_voltage=-1,
                   reset_recovery=5))
    check_repr(Izhikevich(initial_state={"recovery": Choice([0.1])}))
    assert repr(Izhikevich()) == "Izhikevich()"
    assert (repr(
        Izhikevich(tau_recovery=0.01,
                   coupling=0.5,
                   reset_voltage=-60,
                   reset_recovery=6)) ==
            "Izhikevich(tau_recovery=0.01, coupling=0.5, reset_voltage=-60, "
            "reset_recovery=6)")

    check_init_args(Tanh, ["tau_ref", "initial_state"])
    check_repr(Tanh())
    check_repr(Tanh(tau_ref=0.1))