def simhop(net, input, n=10):
"""
Simuate hopfied network
OLD VERSION, now you may use newhop new with native sim method
This function may be deleted in future (use newhop(...).sim())
:Parameters:
net: Net
Simulated recurrent neural network like Hopfield (newhop_old only)
input: array like (N x net.ci)
Train input patterns
n: int (default 10)
Maximum number of simulated steps
:Return:
output: array
Network outputs
full_output: list of array
Network outputs, including the intermediate results
:Exmamle:
>>> from .net import newhop_old
>>> target = [[-1, -1, -1], [1, -1, 1]]
>>> net = newhop_old(target)
>>> simhop(net, target)[0]
array([[-1., -1., -1.],
[ 1., -1., 1.]])
"""
input = np.asfarray(input)
assert input.ndim == 2
assert input.shape[1] == net.layers[-1].co
assert input.shape[1] == net.ci
output = []
for inp in input:
net.layers[-1].out = inp
out = []
for i in range(n):
o = net.step(inp)
if i>0 and np.all(out[-1] == o):
break
out.append(o)
output.append(np.array(out))
return np.array([r[-1] for r in output]), output
def __init__(self, ci, cn, distf=None):
Layer.__init__(self, ci, cn, cn, {'w': (cn, ci), 'conscience': cn})
self.transf = trans.Competitive()
self.initf = init.midpoint
self.out_minmax[:] = np.array([self.transf.out_minmax] * cn)
self.np['conscience'].fill(1.0)
self.distf = euclidean
def __init__(self, ci, cn, transf, max_iter, delta):
Layer.__init__(self, ci, cn, cn, {'w': (cn, ci), 'b': cn})
self.max_iter = max_iter
self.delta = delta
self.transf = transf
self.outs = []
if not hasattr(transf, 'out_minmax'):
test = np.asfarry([-1e100, -100, -10, -1, 0, 1, 10, 100, 1e100])
val = self.transf(test)
self.out_minmax = np.array([val.min(), val.max()] * self.co)
else:
self.out_minmax = np.asfarray([transf.out_minmax] * self.co)
self.initf = None
self.s = np.zeros(self.cn)
def __init__(self, ci, cn, transf):
Layer.__init__(self, ci, cn, cn, {'w': (cn, ci), 'b': cn})
self.transf = transf
if not hasattr(transf, 'out_minmax'):
test = np.asfarry([-1e100, -100, -10, -1, 0, 1, 10, 100, 1e100])
val = self.transf(test)
self.out_minmax = np.array([val.min(), val.max()] * self.co)
else:
self.out_minmax = np.asfarray([transf.out_minmax] * self.co)
# default init function
self.initf = init.initwb_reg
#self.initf = init.initwb_nw
self.s = np.zeros(self.cn)
def initnw(layer):
"""
Nguyen-Widrow initialization function
"""
ci = layer.ci
cn = layer.cn
w_fix = 0.7 * cn ** (1. / ci)
w_rand = np.random.rand(cn, ci) * 2 - 1
# Normalize
if ci == 1:
w_rand = w_rand / np.abs(w_rand)
else:
w_rand = w_rand * np.sqrt(1. / np.square(w_rand).sum(axis=1).reshape(cn, 1))
w = w_fix * w_rand
b = np.array([0]) if cn == 1 else w_fix * np.linspace(-1, 1, cn) * np.sign(w[:, 0])
# Scaleble to inp_active
amin, amax = layer.transf.inp_active
amin = -1 if amin == -np.Inf else amin
amax = 1 if amax == np.Inf else amax
x = 0.5 * (amax - amin)
y = 0.5 * (amax + amin)
w = x * w
b = x * b + y
# Scaleble to inp_minmax
minmax = layer.inp_minmax.copy()
minmax[np.isneginf(minmax)] = -1
minmax[np.isinf(minmax)] = 1
x = 2. / (minmax[:, 1] - minmax[:, 0])
y = 1. - minmax[:, 1] * x
w = w * x
b += np.dot(w, y)
layer.np['w'][:] = w
layer.np['b'][:] = b
return