def get_service(self):
responses.add(responses.POST, AUTH_URL, json=AUTH_RESP)
responses.add(responses.GET, WORKFLOW_URL, json=ROOT_RESP)
client = Client(api_key=REFRESH_TOKEN)
svc = client.service("workflow")
return svc
def get_service(self, project=None):
responses.add(responses.POST, AUTH_URL, json=AUTH_RESP)
responses.add(responses.GET, ROOT_URL, json=ROOT_RESP)
client = Client(api_key=REFRESH_TOKEN)
svc = client.service("query", project=project)
return svc
def get_service(self):
responses.add(responses.POST, AUTH_URL, json=AUTH_RESP)
responses.add(responses.GET, PIPELINES_URL, json=ROOT_RESP)
client = Client(api_key=REFRESH_TOKEN)
svc = client.service("pipelines")
return svc
def get_service(self):
responses.add(responses.POST, AUTH_URL, json=AUTH_RESP)
responses.add(responses.GET, PHENOTYPE_URL, json=ROOT_RESP)
responses.add(responses.GET, PROJECTS_URL, json=PROJECTS_RESP)
client = Client(api_key=REFRESH_TOKEN)
svc = client.service("phenotype", project=PROJECT)
return svc
def test_client(self):
with self.assertRaises(InvalidProfile):
_ = Client(profile="dummy")
cfg.get("profiles")["dummy"] = {}
client = Client(profile="dummy")
with self.assertRaises(ServiceNotFound):
svc = client.service("notfound")
def get_service(self):
responses.add(responses.POST, AUTH_URL, json=AUTH_RESP)
responses.add(responses.GET, ROOT_URL, json=ROOT_RESP)
responses.add(responses.GET,
PROJECTS_URL + "?project_name=testing",
json=PROJECTS_RESP)
responses.add(responses.GET, USER_URL, json=USER_RESP)
responses.add(responses.GET, CREDENTIALS_URL, json=CREDENTIALS_RESP)
client = Client(api_key=REFRESH_TOKEN)
svc = client.service("project", project="testing")
return svc
def test_default_profile(self):
cfg.get("profiles")["dummy"] = {}
cfg.set({"default_profile": "dummy"})
client = Client()
os.environ["GOR_API_KEY"] = "ble"
cfg.set({"default_profile": None})
with self.assertRaises(Exception):
client = Client()
with patch("nextcode.client.root_url_from_api_key"):
client = Client()
del os.environ["GOR_API_KEY"]
with self.assertRaises(InvalidProfile):
client = Client()
def test_get_access_token(self):
cfg.get("profiles")["dummy"] = {"api_key": ACCESS_TOKEN, "root_url": "dummy"}
client = Client(profile="dummy")
with responses.RequestsMock() as rsps:
rsps.add(responses.POST, AUTH_URL, json=AUTH_RESP)
jwt = client.get_access_token()
self.assertEqual(jwt, ACCESS_TOKEN)
payload = client.get_access_token(True)
self.assertTrue(isinstance(payload, dict))
repr(client)
with responses.RequestsMock() as rsps:
rsps.add(responses.POST, AUTH_URL, body="bla", status=400)
with self.assertRaises(InvalidToken):
jwt = client.get_access_token()
with responses.RequestsMock() as rsps:
rsps.add(responses.POST, AUTH_URL, body="Refresh token expired", status=400)
with self.assertRaises(InvalidToken) as ctx:
jwt = client.get_access_token()
self.assertIn("Refresh token has expired", repr(ctx.exception))
with responses.RequestsMock() as rsps:
rsps.add(
responses.POST,
AUTH_URL,
json={"error_description": "errordesc"},
status=400,
)
with self.assertRaises(InvalidToken) as ctx:
jwt = client.get_access_token()
self.assertIn("errordesc", repr(ctx.exception))
def test_localhost(self):
os.environ["SERVICE_IN_ROOT"] = "1"
responses.add(responses.POST, AUTH_URL, json=AUTH_RESP)
responses.add(responses.GET, "http://localhost/", json=ROOT_RESP)
client = Client(api_key=REFRESH_TOKEN)
client.profile.root_url = "http://localhost"
_ = BaseService(client, service_path="service")
client.profile.root_url = ""
with self.assertRaises(InvalidProfile):
_ = BaseService(client, service_path="service")
client.profile.root_url = "http://localhost"
client.profile.skip_auth = True
_ = BaseService(client, service_path="service")
del os.environ["SERVICE_IN_ROOT"]
def test_workflow(self):
responses.add(responses.POST, AUTH_URL, json=AUTH_RESP)
responses.add(responses.GET, WORKFLOW_URL, json=ROOT_RESP)
client = Client(api_key=REFRESH_TOKEN)
svc = client.service("workflow")
svc.status()
svc.status(force=True)
ret = svc.endpoints
responses.add(responses.GET, WORKFLOW_URL + "/documentation", json={})
ret = svc.openapi_spec()
with responses.RequestsMock(
assert_all_requests_are_fired=False) as rsps:
rsps.add(responses.GET, WORKFLOW_URL + "/health")
ret = svc.healthy()
self.assertTrue(ret)
with responses.RequestsMock(
assert_all_requests_are_fired=False) as rsps:
rsps.add(responses.GET, WORKFLOW_URL + "/health", status=404)
ret = svc.healthy()
self.assertFalse(ret)
def test_available_services(self):
ret = Client.available_services()
self.assertTrue(isinstance(ret, list))
def setUp(self):
super(ServicesTest, self).setUp()
self.client = Client(api_key=REFRESH_TOKEN)