def test_fetch_nyu_rest():
# First session, all subjects
nyu = func.fetch_nyu_rest(data_dir=tst.tmpdir, verbose=0)
assert_equal(len(tst.mock_url_request.urls), 2)
assert_equal(len(nyu.func), 25)
assert_equal(len(nyu.anat_anon), 25)
assert_equal(len(nyu.anat_skull), 25)
assert_true(np.all(np.asarray(nyu.session) == 1))
# All sessions, 12 subjects
tst.mock_url_request.reset()
nyu = func.fetch_nyu_rest(data_dir=tst.tmpdir,
sessions=[1, 2, 3],
n_subjects=12,
verbose=0)
# Session 1 has already been downloaded
assert_equal(len(tst.mock_url_request.urls), 2)
assert_equal(len(nyu.func), 36)
assert_equal(len(nyu.anat_anon), 36)
assert_equal(len(nyu.anat_skull), 36)
s = np.asarray(nyu.session)
assert_true(np.all(s[:12] == 1))
assert_true(np.all(s[12:24] == 2))
assert_true(np.all(s[24:] == 3))
assert_not_equal(nyu.description, '')
def test_fetch_nyu_rest(tmp_path, request_mocker):
# First session, all subjects
with pytest.warns(np.VisibleDeprecationWarning,
match='fetch_nyu_rest has been deprecated'):
nyu = func.fetch_nyu_rest(data_dir=str(tmp_path), verbose=0)
assert request_mocker.url_count == 2
assert len(nyu.func) == 25
assert len(nyu.anat_anon) == 25
assert len(nyu.anat_skull) == 25
assert np.all(np.asarray(nyu.session) == 1)
# All sessions, 12 subjects
with pytest.warns(np.VisibleDeprecationWarning,
match='fetch_nyu_rest has been deprecated'):
nyu = func.fetch_nyu_rest(data_dir=str(tmp_path),
sessions=[1, 2, 3],
n_subjects=12, verbose=0)
# Session 1 already downloaded, 2b and 3b not needed for 12 subjects
assert request_mocker.url_count == 4
assert len(nyu.func) == 36
assert len(nyu.anat_anon) == 36
assert len(nyu.anat_skull) == 36
s = np.asarray(nyu.session)
assert np.all(s[:12] == 1)
assert np.all(s[12:24] == 2)
assert np.all(s[24:] == 3)
with pytest.warns(np.VisibleDeprecationWarning,
match='fetch_nyu_rest has been deprecated'):
nyu = func.fetch_nyu_rest(data_dir=str(tmp_path),
sessions=[1, 2, 3],
n_subjects=None, verbose=0)
# For the full dataset (a, b) x (1, 2, 3) = 6 files are downloaded
assert request_mocker.url_count == 6
assert nyu.description != ''
def test_fetch_nyu_rest(tmp_path, request_mocker):
# First session, all subjects
with pytest.warns(np.VisibleDeprecationWarning,
match='fetch_nyu_rest has been deprecated'):
nyu = func.fetch_nyu_rest(data_dir=str(tmp_path), verbose=0)
assert len(tst.mock_url_request.urls) == 2
assert len(nyu.func) == 25
assert len(nyu.anat_anon) == 25
assert len(nyu.anat_skull) == 25
assert np.all(np.asarray(nyu.session) == 1)
# All sessions, 12 subjects
tst.mock_url_request.reset()
with pytest.warns(np.VisibleDeprecationWarning,
match='fetch_nyu_rest has been deprecated'):
nyu = func.fetch_nyu_rest(data_dir=str(tmp_path),
sessions=[1, 2, 3],
n_subjects=12,
verbose=0)
# Session 1 has already been downloaded
assert len(tst.mock_url_request.urls) == 2
assert len(nyu.func) == 36
assert len(nyu.anat_anon) == 36
assert len(nyu.anat_skull) == 36
s = np.asarray(nyu.session)
assert np.all(s[:12] == 1)
assert np.all(s[12:24] == 2)
assert np.all(s[24:] == 3)
assert nyu.description != ''
def test_fetch_nyu_rest():
# First session, all subjects
nyu = func.fetch_nyu_rest(data_dir=tmpdir, verbose=0)
assert_equal(len(mock_url_request.urls), 2)
assert_equal(len(nyu.func), 25)
assert_equal(len(nyu.anat_anon), 25)
assert_equal(len(nyu.anat_skull), 25)
assert_true(np.all(np.asarray(nyu.session) == 1))
# All sessions, 12 subjects
mock_url_request.reset()
nyu = func.fetch_nyu_rest(data_dir=tmpdir, sessions=[1, 2, 3], n_subjects=12, verbose=0)
# Session 1 has already been downloaded
assert_equal(len(mock_url_request.urls), 2)
assert_equal(len(nyu.func), 36)
assert_equal(len(nyu.anat_anon), 36)
assert_equal(len(nyu.anat_skull), 36)
s = np.asarray(nyu.session)
assert_true(np.all(s[:12] == 1))
assert_true(np.all(s[12:24] == 2))
assert_true(np.all(s[24:] == 3))
