예제 #1
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 def test_brunel_round_trip(self):
     path = 'network/Brunel2000/SR'
     brunel = lookup(path)
     save(brunel, path)
     reloaded_brunel = lookup(path)
     # FIXME: Should check a modified version of the model and then resave
     #        the original
     self.assertEqual(brunel, reloaded_brunel)
예제 #2
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 def test_brunel_round_trip(self):
     path = 'network/Brunel2000/SR'
     brunel = lookup(path)
     save(brunel, path)
     reloaded_brunel = lookup(path)
     # FIXME: Should check a modified version of the model and then resave
     #        the original        
     self.assertEqual(brunel, reloaded_brunel)
         
예제 #3
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 def test_liaf_round_trip(self):
     path = 'neuron/LeakyIntegrateAndFire'
     name =  'LeakyIntegrateAndFire'
     liaf_doc = lookup(path)
     liaf = lookup(path, name)
     save(liaf, path, name)
     reloaded_doc = lookup(path)
     # FIXME: Should check a modified version of the model and then resave
     #        the original
     self.assertEqual(liaf_doc, reloaded_doc)
예제 #4
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 def test_liaf_round_trip(self):
     path = 'neuron/LeakyIntegrateAndFire'
     name = 'LeakyIntegrateAndFire'
     liaf_doc = lookup(path)
     liaf = lookup(path, name)
     save(liaf, path, name)
     reloaded_doc = lookup(path)
     # FIXME: Should check a modified version of the model and then resave
     #        the original
     self.assertEqual(liaf_doc, reloaded_doc)
예제 #5
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파일: static.py 프로젝트: apdavison/lib9ML
    if args.mode == 'print':
        document = Document()
        print(
            etree.tostring(E.NineML(create_static().to_xml(document),
                                    parameterise_static().to_xml(document)),
                           encoding="UTF-8",
                           pretty_print=True,
                           xml_declaration=True))
    elif args.mode == 'compare':
        if ninemlcatalog is None:
            raise Exception("NineML catalog is not installed")
        local_version = create_static()
        catalog_version = ninemlcatalog.load(catalog_path, local_version.name)
        mismatch = local_version.find_mismatch(catalog_version)
        if mismatch:
            print("Local version differs from catalog version:\n{}".format(
                mismatch))
        else:
            print("Local version matches catalog version")
    elif args.mode == 'save':
        if ninemlcatalog is None:
            raise Exception("NineML catalog is not installed")
        dynamics = create_static()
        ninemlcatalog.save(dynamics, catalog_path, dynamics.name)
        params = parameterise_static(
            ninemlcatalog.load(catalog_path, dynamics.name))
        ninemlcatalog.save(params, catalog_path, params.name)
        print("Saved '{}' and '{}' to catalog".format(dynamics.name,
                                                      params.name))
예제 #6
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파일: static.py 프로젝트: apdavison/lib9ML
        document = Document()
        print(etree.tostring(
            E.NineML(
                create_static().to_xml(document),
                parameterise_static().to_xml(document)),
            encoding="UTF-8", pretty_print=True, xml_declaration=True))
    elif args.mode == 'compare':
        if ninemlcatalog is None:
            raise Exception(
                "NineML catalog is not installed")
        local_version = create_static()
        catalog_version = ninemlcatalog.load(catalog_path,
                                               local_version.name)
        mismatch = local_version.find_mismatch(catalog_version)
        if mismatch:
            print ("Local version differs from catalog version:\n{}"
                   .format(mismatch))
        else:
            print("Local version matches catalog version")
    elif args.mode == 'save':
        if ninemlcatalog is None:
            raise Exception(
                "NineML catalog is not installed")
        dynamics = create_static()
        ninemlcatalog.save(dynamics, catalog_path, dynamics.name)
        params = parameterise_static(
            ninemlcatalog.load(catalog_path, dynamics.name))
        ninemlcatalog.save(params, catalog_path, params.name)
        print("Saved '{}' and '{}' to catalog".format(dynamics.name,
                                                      params.name))