def test_Surface2VolTransform_outputs():
output_map = dict(transformed_file=dict(),
vertexvol_file=dict(),
)
outputs = Surface2VolTransform.output_spec()
for key, metadata in output_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_Surface2VolTransform_inputs():
input_map = dict(
args=dict(argstr='%s', ),
environ=dict(
nohash=True,
usedefault=True,
),
hemi=dict(
argstr='--hemi %s',
mandatory=True,
),
ignore_exception=dict(
nohash=True,
usedefault=True,
),
mkmask=dict(argstr='--mkmask', ),
projfrac=dict(argstr='--projfrac %s', ),
reg_file=dict(
argstr='--volreg %s',
mandatory=True,
xor=['subject_id'],
),
source_file=dict(
argstr='--surfval %s',
copyfile=False,
mandatory=True,
),
subject_id=dict(
argstr='--identity %s',
xor=['reg_file'],
),
subjects_dir=dict(argstr='--sd %s', ),
surf_name=dict(argstr='--surf %s', ),
template_file=dict(argstr='--template %s', ),
terminal_output=dict(
mandatory=True,
nohash=True,
),
transformed_file=dict(
argstr='--outvol %s',
hash_files=False,
name_source=['source_file'],
name_template='%s_asVol.nii',
),
vertexvol_file=dict(
argstr='--vtxvol %s',
hash_files=False,
name_source=['source_file'],
name_template='%s_asVol_vertex.nii',
),
)
inputs = Surface2VolTransform.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
def test_Surface2VolTransform_outputs():
output_map = dict(
transformed_file=dict(),
vertexvol_file=dict(),
)
outputs = Surface2VolTransform.output_spec()
for key, metadata in output_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_Surface2VolTransform_inputs():
input_map = dict(args=dict(argstr='%s',
),
environ=dict(nohash=True,
usedefault=True,
),
hemi=dict(argstr='--hemi %s',
mandatory=True,
),
ignore_exception=dict(nohash=True,
usedefault=True,
),
mkmask=dict(argstr='--mkmask',
),
projfrac=dict(argstr='--projfrac %s',
),
reg_file=dict(argstr='--volreg %s',
mandatory=True,
xor=['subject_id'],
),
source_file=dict(argstr='--surfval %s',
copyfile=False,
mandatory=True,
),
subject_id=dict(argstr='--identity %s',
xor=['reg_file'],
),
subjects_dir=dict(argstr='--sd %s',
),
surf_name=dict(argstr='--surf %s',
),
template_file=dict(argstr='--template %s',
),
terminal_output=dict(mandatory=True,
nohash=True,
),
transformed_file=dict(argstr='--outvol %s',
hash_files=False,
name_source=['source_file'],
name_template='%s_asVol.nii',
),
vertexvol_file=dict(argstr='--vtxvol %s',
hash_files=False,
name_source=['source_file'],
name_template='%s_asVol_vertex.nii',
),
)
inputs = Surface2VolTransform.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value