def main():
parser = argparse.ArgumentParser(
description="Perform data reduction on entries")
parser.add_argument('-d',
'--directory',
required=True,
help='scan directory')
parser.add_argument('-e',
'--entries',
default=['f1', 'f2', 'f3'],
nargs='+',
help='names of entries to be processed')
parser.add_argument('-l',
'--link',
action='store_true',
help='link wrapper file to raw data')
parser.add_argument('-m',
'--max',
action='store_true',
help='find maximum counts')
parser.add_argument('-f', '--find', action='store_true', help='find peaks')
parser.add_argument('-c',
'--copy',
action='store_true',
help='copy parameters')
parser.add_argument('-r',
'--refine',
action='store_true',
help='refine lattice parameters')
parser.add_argument('-t',
'--transform',
action='store_true',
help='perform CCTW transforms')
parser.add_argument('-M',
'--mask',
action='store_true',
help='perform CCTW transforms with 3D mask')
parser.add_argument('-b',
'--combine',
action='store_true',
help='combine CCTW transforms')
parser.add_argument('-o',
'--overwrite',
action='store_true',
help='overwrite existing maximum')
parser.add_argument('-q',
'--queue',
action='store_true',
help='add to server task queue')
args = parser.parse_args()
for entry in args.entries:
reduce = NXReduce(entry,
args.directory,
link=args.link,
maxcount=args.max,
find=args.find,
copy=args.copy,
refine=args.refine,
transform=args.transform,
mask=args.mask,
overwrite=args.overwrite)
if args.queue:
reduce.queue()
else:
reduce.nxreduce()
if args.combine:
reduce = NXMultiReduce(args.directory,
entries=args.entries,
mask=args.mask,
overwrite=args.overwrite)
if args.queue:
reduce.queue()
else:
reduce.nxcombine()
def main():
parser = argparse.ArgumentParser(
description="Perform data reduction on entries")
parser.add_argument('-d',
'--directory',
required=True,
help='scan directory')
parser.add_argument('-e',
'--entries',
nargs='+',
help='names of entries to be processed')
parser.add_argument('-l',
'--link',
action='store_true',
help='link wrapper file to raw data')
parser.add_argument('-m',
'--max',
action='store_true',
help='find maximum counts')
parser.add_argument('-f', '--find', action='store_true', help='find peaks')
parser.add_argument('-c',
'--copy',
action='store_true',
help='copy parameters')
parser.add_argument('-r',
'--refine',
action='store_true',
help='refine lattice parameters')
parser.add_argument('-p',
'--prepare',
action='store_true',
help='prepare 3D masks')
parser.add_argument('-t',
'--transform',
action='store_true',
help='perform CCTW transforms')
parser.add_argument('-C',
'--combine',
action='store_true',
help='combine CCTW transforms')
parser.add_argument('-P',
'--pdf',
action='store_true',
help='perform PDF transforms')
parser.add_argument('-R',
'--regular',
action='store_true',
help='perform regular CCTW transforms')
parser.add_argument('-M',
'--mask',
action='store_true',
help='perform CCTW transforms with 3D mask')
parser.add_argument('-o',
'--overwrite',
action='store_true',
help='overwrite existing maximum')
parser.add_argument('-q',
'--queue',
action='store_true',
help='add to server task queue')
args = parser.parse_args()
if args.entries:
entries = args.entries
else:
entries = NXMultiReduce(args.directory).entries
for entry in entries:
reduce = NXReduce(entry=entry,
directory=args.directory,
link=args.link,
maxcount=args.max,
find=args.find,
copy=args.copy,
refine=args.refine,
prepare=args.prepare,
transform=args.transform,
combine=args.combine,
pdf=args.pdf,
regular=args.regular,
mask=args.mask,
overwrite=args.overwrite)
if args.queue:
reduce.queue('nxreduce', args)
else:
reduce.combine = reduce.pdf = False
reduce.nxreduce()
if (args.combine or args.pdf) and not args.queue:
reduce = NXMultiReduce(args.directory,
combine=args.combine,
pdf=args.pdf,
regular=args.regular,
mask=args.mask,
overwrite=args.overwrite)
reduce.nxreduce()