예제 #1
0
def createTestDB ( project_name, channel_list=['unit_anno'], channel_type=ANNOTATION, channel_datatype=UINT32, public=0, ximagesize=10000, yimagesize=10000, zimagesize=1000, xvoxelres=4.0, yvoxelres=4.0, zvoxelres=3.0, scalingoption=ZSLICES, scalinglevels=5, readonly=READONLY_FALSE, propagate=NOT_PROPAGATED, window=[0,0], time=[0,0], default=False, ocp_version=OCP_VERSION ):
  """Create a unit test data base on the specified sit and name"""
  
  unituser = User.objects.get(username='******')

  ds = Dataset ( dataset_name="unittest", user=unituser, ximagesize=ximagesize, yimagesize=yimagesize, zimagesize=zimagesize,  xoffset=0, yoffset=0, zoffset=1, xvoxelres=xvoxelres, yvoxelres=yvoxelres, zvoxelres=zvoxelres, scalingoption=scalingoption, scalinglevels=scalinglevels, starttime=time[0], endtime=time[1], dataset_description="Unit test" ) 
  ds.save()


  # RBTODO need to add a window and a project

  # make the project entry
  pr = Project (project_name=project_name, project_description='Unit test', user=unituser, dataset=ds, ocp_version=ocp_version, kvengine=kvengine_to_test.kvengine, kvserver=kvengine_to_test.kvserver)
  pr.save()

  # and create the database
  pd = ocpcaproj.OCPCAProjectsDB()

  # create a token
  tk = Token (token_name = project_name, user=unituser, token_description = 'Unit test token', project_id=pr, public=public)
  tk.save()

  pd.newOCPCAProject( pr.project_name )
  try:
    for channel_name in channel_list:
      ch = Channel (channel_name=channel_name, channel_type=channel_type, channel_datatype=channel_datatype, channel_description='Unit test channel', project_id=pr, readonly=readonly, propagate=propagate, resolution=0, exceptions=1,startwindow=window[0], endwindow=window[1], default=default)
      ch.save()
      pd.newOCPCAChannel(pr.project_name, ch.channel_name)
  except Exception, e:
    pass
예제 #2
0
def extractProjectDict(pr_dict):
  """Generate a project object from the JSON flle"""

  pr = Project()
  tk = Token()

  try:
    pr.project_name = pr_dict['project_name']
  except Exception, e:
    print "Missing required fields"
    raise
예제 #3
0
def extractProjectDict(pr_dict):
  """Generate a project object from the JSON flle"""

  pr = Project()
  tk = Token()

  try:
    pr.project_name = pr_dict['project_name']
  except Exception, e:
    print "Missing required fields"
    raise
예제 #4
0
def createTestDB(project_name,
                 channel_list=['unit_anno'],
                 channel_type=ANNOTATION,
                 channel_datatype=UINT32,
                 public=0,
                 ximagesize=10000,
                 yimagesize=10000,
                 zimagesize=1000,
                 xvoxelres=4.0,
                 yvoxelres=4.0,
                 zvoxelres=3.0,
                 scalingoption=ZSLICES,
                 scalinglevels=5,
                 readonly=READONLY_FALSE,
                 propagate=NOT_PROPAGATED,
                 window=[0, 0],
                 time=[0, 0],
                 default=False,
                 ocp_version=OCP_VERSION):
    """Create a unit test data base on the specified sit and name"""

    unituser = User.objects.get(username='******')

    ds = Dataset(dataset_name="unittest",
                 user=unituser,
                 ximagesize=ximagesize,
                 yimagesize=yimagesize,
                 zimagesize=zimagesize,
                 xoffset=0,
                 yoffset=0,
                 zoffset=1,
                 xvoxelres=xvoxelres,
                 yvoxelres=yvoxelres,
                 zvoxelres=zvoxelres,
                 scalingoption=scalingoption,
                 scalinglevels=scalinglevels,
                 starttime=time[0],
                 endtime=time[1],
                 dataset_description="Unit test")
    ds.save()

    # RBTODO need to add a window and a project

    # make the project entry
    pr = Project(project_name=project_name,
                 project_description='Unit test',
                 user=unituser,
                 dataset=ds,
                 ocp_version=ocp_version,
                 kvengine=kvengine_to_test.kvengine,
                 kvserver=kvengine_to_test.kvserver)
    pr.save()

    # and create the database
    pd = ocpcaproj.OCPCAProjectsDB()

    # create a token
    tk = Token(token_name=project_name,
               user=unituser,
               token_description='Unit test token',
               project_id=pr,
               public=public)
    tk.save()

    pd.newOCPCAProject(pr.project_name)
    try:
        for channel_name in channel_list:
            ch = Channel(channel_name=channel_name,
                         channel_type=channel_type,
                         channel_datatype=channel_datatype,
                         channel_description='Unit test channel',
                         project_id=pr,
                         readonly=readonly,
                         propagate=propagate,
                         resolution=0,
                         exceptions=1,
                         startwindow=window[0],
                         endwindow=window[1],
                         default=default)
            ch.save()
            pd.newOCPCAChannel(pr.project_name, ch.channel_name)
    except Exception, e:
        pass